HHsearch alignment of GI: 254780891 and MMDB domain: 1ysr_A_
>1ysr_A (A:) Sensor-type histidine kinase PRRB; ATP-binding domain, structural genomics, mycobacterium tuberculosis structural proteomics project; 1.78A {Mycobacterium tuberculosis}
Probab=99.92 E-value=8.4e-25 Score=177.03 Aligned_cols=109 Identities=13% Similarity=-0.051 Sum_probs=97.8
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHCCCCC---CCCCCCCH
Q ss_conf 000001000123444567664687653200111112355772047999878984402458874054545---78998720
Q gi|254780891|r 105 TGEKIDLSRERAKILLNLFMVAHASLPRGGKVTISVQDSKNENIFSLKINGNLARFPEKFTQIVDGNVE---STIDSHDI 181 (215)
Q Consensus 105 ~~~~~~~~~~~~qvl~NLi~NA~~a~~~gg~I~i~~~~~~~~~~i~V~D~G~Gi~~~e~~~~~~~~~~~---~~~~g~Gl 181 (215)
......++..+.|++.||+.||++|++ ++.|.|++..+++.+.|.|+|+|+||+ ++..+++|++|+. .+..|+||
T Consensus 37 ~~~v~~d~~~l~~il~NLl~NAik~~~-~~~I~i~~~~~~~~i~i~V~D~G~Gi~-~e~~~~iFe~F~r~~~~~~~G~GL 114 (150)
T 1ysr_A 37 TCIIVGLPAGLRLAVDNAIANAVKHGG-ATLVQLSAVSSRAGVEIAIDDNGSGVP-EGERQVVFERFSRGSTASHSGSGL 114 (150)
T ss_dssp CCEEEECHHHHHHHHHHHHHHHHHTTC-CSEEEEEEEEETTEEEEEEEESSSCCC-GGGHHHHHTSCC-----------C
T ss_pred CCEEEECHHHHHHHHHHHHHHHHHHCC-CCEEEEEEEECCCEEEEEEEECCCCCC-HHHHHHHCCCCCCCCCCCCCCCCH
T ss_conf 967998899999999999999998579-948999998249989999998587879-899998626321589999896077
Q ss_pred HHHHHHHHHHHCCCEEEEEEECCCCEEEEEEEEC
Q ss_conf 4999999999709879999877992699999419
Q gi|254780891|r 182 QFYYVILLAHENKIRLLPEIIDDHNVVLSALLEK 215 (215)
Q Consensus 182 Gl~~~~~i~~~~gG~i~v~~~~~~g~~f~~~l~~ 215 (215)
||++|+.+++.|||+|++++.+++|++|+++||.
T Consensus 115 GL~i~k~i~~~hgG~i~v~s~~~~Gt~f~i~lP~ 148 (150)
T 1ysr_A 115 GLALVAQQAQLHGGTASLENSPLGGARLVLRLPG 148 (150)
T ss_dssp CCHHHHHHHHHTTCEEEEEECTTSSEEEEEEEEC
T ss_pred HHHHHHHHHHHCCCEEEEEECCCCEEEEEEEEEC
T ss_conf 9999999999859989999669981699999984