HHsearch alignment of GI: 254780891 and MMDB domain: 3a0r_A_130-194
>3a0r_A (A:130-194) Sensor protein; four helix bundle, PAS fold, kinase, phosphoprotein, transferase, two-component regulatory system; 3.80A {Thermotoga maritima}
Probab=98.41 E-value=6.9e-07 Score=63.21 Aligned_cols=49 Identities=16% Similarity=0.174 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCC----CCHHHHHHHHHHHHHHHHHHH
Q ss_conf 9997745454227999999999996144----301478988899999999863
Q gi|254780891|r 17 LLCSRICHDIISPIGAIHNSLELLDEVG----IEDEVMQLIRLSSMSAIIRLK 65 (215)
Q Consensus 17 llas~IaHdlrtPL~~I~~~~elL~~~~----~~~~~~~~i~~~~~~~~~l~~ 65 (215)
.++++|||||||||++|.+++++|.... ...++.+.+.+.+.++..+++
T Consensus 5 ~~~a~isHelrtPL~~I~~~~e~l~~~~~~~~~~~~~~~~i~~~~~~l~~li~ 57 (65)
T 3a0r_A 5 EMTARVAHEIRNPITIIGGFIMRMKKHLDDPETLKKYINIITNELSRLETIVK 57 (65)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTSCSCSSCTTHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 11202243333131499999999971369869999999999986667899998