HHsearch alignment of GI: 254780891 and MMDB domain: 3a0r_A_206-349
>3a0r_A (A:206-349) Sensor protein; four helix bundle, PAS fold, kinase, phosphoprotein, transferase, two-component regulatory system; 3.80A {Thermotoga maritima}
Probab=99.91 E-value=4.1e-25 Score=178.98 Aligned_cols=128 Identities=14% Similarity=0.104 Sum_probs=103.9
Q ss_pred HHHHHHHHHH-CCCCCCCCCCCC---CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCH
Q ss_conf 3444443220-122332110000---001000123444567664687653200111112355772047999878984402
Q gi|254780891|r 86 IEQVIEDFIA-VDKRVQVSWTGE---KIDLSRERAKILLNLFMVAHASLPRGGKVTISVQDSKNENIFSLKINGNLARFP 161 (215)
Q Consensus 86 ~~~~~~~~~~-~~~~~~~~~~~~---~~~~~~~~~qvl~NLi~NA~~a~~~gg~I~i~~~~~~~~~~i~V~D~G~Gi~~~ 161 (215)
+...+..... +...+.++.+.. ...++..+.|++.||+.||++|++++|+|.|++..+++.+.|+|+|+|+||+ +
T Consensus 7 ~~~~~~~~~~~~~i~~~~~~~~~~~~i~~d~~~l~~vl~NLi~NAik~~~~~g~I~i~~~~~~~~~~i~V~D~G~Gi~-~ 85 (144)
T 3a0r_A 7 VYVLFEEKIRKMNIDFCFETDNEDLRVEADRTRIKQVLINLVQNAIEATGENGKIKITSEDMYTKVRVSVWNSGPPIP-E 85 (144)
T ss_dssp HHHHHHHHHTTTTCCCEEEESCSCCEEEECHHHHHHHHHHHHTHHHHTTCTTCCEEEEEEEETTEEEEEEEEESCCCC-G
T ss_pred HHHHHHHHHHHCCCEEEEECCCCCEEEEECHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEEEEEEECCCCCC-H
T ss_conf 999879999864948997237875389952067887899999999983405762699997046489999997899979-8
Q ss_pred HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH-CCCEEEEEEECCCCEEEEEEEEC
Q ss_conf 4588740545457899872049999999997-09879999877992699999419
Q gi|254780891|r 162 EKFTQIVDGNVESTIDSHDIQFYYVILLAHE-NKIRLLPEIIDDHNVVLSALLEK 215 (215)
Q Consensus 162 e~~~~~~~~~~~~~~~g~GlGl~~~~~i~~~-~gG~i~v~~~~~~g~~f~~~l~~ 215 (215)
+...++|+||++++..|+|||||+|+++++. |||.+.+ +.+++|++|+++||+
T Consensus 86 ~~~~~lF~~f~~~k~~G~GLGL~i~~~iv~~~~Gg~~~~-~s~~~Gt~f~i~lP~ 139 (144)
T 3a0r_A 86 ELKEKIFSPFFTTKTQGTGLGLSICRKIIEDEHGGKIWT-ENRENGVVFIFEIPK 139 (144)
T ss_dssp GGGTTTSSSCCCC------CCCTHHHHHHHHTTCSBCCE-EECSSEEEEEEEEES
T ss_pred HHHHHHCCCCEECCCCCCCHHHHHHHHHHHHCCCCEEEE-EECCCCEEEEEEECC
T ss_conf 999870699502899970646999999999808998999-966996899999469