HHsearch alignment of GI: 254780891 and MMDB domain: 3a0y_A_
>3a0y_A (A:) Sensor protein; ATP-LID, kinase, phosphoprotein, transferase, two-component regulatory system; 1.57A {Thermotoga maritima} PDB: 3a0t_A* 3a0x_A 3a0w_A 3a0z_A
Probab=99.93 E-value=5.1e-26 Score=184.77 Aligned_cols=135 Identities=13% Similarity=0.063 Sum_probs=110.4
Q ss_pred CCCCCHHHHHHHHHHH-CCCCCCCCCCCC---CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECC
Q ss_conf 0000013444443220-122332110000---001000123444567664687653200111112355772047999878
Q gi|254780891|r 80 LIGLGDIEQVIEDFIA-VDKRVQVSWTGE---KIDLSRERAKILLNLFMVAHASLPRGGKVTISVQDSKNENIFSLKING 155 (215)
Q Consensus 80 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---~~~~~~~~~qvl~NLi~NA~~a~~~gg~I~i~~~~~~~~~~i~V~D~G 155 (215)
...+.++...++.... .+.++.++.+.. ...++..+.|++.||+.||++|+++||+|+|+++..++.+.|+|+|+|
T Consensus 9 ~~~i~~~~~~~~~~~~~~~i~~~~~~~~~~~~v~~D~~~l~qvl~NLi~NAik~~~~g~~i~i~~~~~~~~~~i~v~D~G 88 (152)
T 3a0y_A 9 NELIREVYVLFEEKIRKMNIDFCFETDNEDLRVEADRTRIKQVLINLVQNAIEATGENGKIKITSEDMYTKVRVSVWNSG 88 (152)
T ss_dssp HHHHHHHHHHHHHHHHHTTCEEEEEESCSSCEEEECHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEECSSEEEEEEEEES
T ss_pred HHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEEECHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCEEEEEEEECC
T ss_conf 99999999999999987797999982898879999799999999999999878648998899999976988999999657
Q ss_pred CCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEEEC
Q ss_conf 984402458874054545789987204999999999709879999877992699999419
Q gi|254780891|r 156 NLARFPEKFTQIVDGNVESTIDSHDIQFYYVILLAHENKIRLLPEIIDDHNVVLSALLEK 215 (215)
Q Consensus 156 ~Gi~~~e~~~~~~~~~~~~~~~g~GlGl~~~~~i~~~~gG~i~v~~~~~~g~~f~~~l~~ 215 (215)
+||+ ++...++|+++++++..|+|||||+|+.+++.|+|.+.+.++.++|++|+++||+
T Consensus 89 ~GI~-~~~~~~iFe~f~~~~~~G~GLGL~i~~~iv~~~~g~~~~~~s~~~Gt~f~i~lP~ 147 (152)
T 3a0y_A 89 PPIP-EELKEKIFSPFFTTKTQGTGLGLSICRKIIEDEHGGKIWTENRENGVVFIFEIPK 147 (152)
T ss_dssp CCCC-GGGTTGGGSTTCCCC--CCCCSHHHHHHHHHTTTSCEEEEEEETTEEEEEEEEES
T ss_pred CCCC-HHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEEECC
T ss_conf 9988-8999872799455898985867999999999848998999957996799999629