HHsearch alignment of GI: 254780891 and MMDB domain: 3ehh_A_89-218
>3ehh_A (A:89-218) Sensor kinase (YOCF protein); four-helix bundle, GHL ATPase domain, transferase; HET: MSE ADP; 2.10A {Bacillus subtilis} PDB: 3ehj_A* 3gie_A* 3gif_A* 3gig_A* 3ehf_A*
Probab=99.72 E-value=3.9e-17 Score=128.30 Aligned_cols=117 Identities=11% Similarity=-0.024 Sum_probs=89.6
Q ss_pred CCHHHHHHHHHH-HCCCCCCCCCCCCCC----CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCC
Q ss_conf 001344444322-012233211000000----100012344456766468765320011111235577204799987898
Q gi|254780891|r 83 LGDIEQVIEDFI-AVDKRVQVSWTGEKI----DLSRERAKILLNLFMVAHASLPRGGKVTISVQDSKNENIFSLKINGNL 157 (215)
Q Consensus 83 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~----~~~~~~~qvl~NLi~NA~~a~~~gg~I~i~~~~~~~~~~i~V~D~G~G 157 (215)
+.++.+.+...+ .....+.+..+.+.. ..+..+.|++.||+.||++|++ ++.|+|.+...++.+.|+|+|+|+|
T Consensus 6 L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~il~nli~NAikh~~-~~~I~i~~~~~~~~~~i~V~D~G~G 84 (130)
T 3ehh_A 6 LKDELINIKQILEAADIXFIYEEEKWPENISLLNENILSXCLKEAVTNVVKHSQ-AKTCRVDIQQLWKEVVITVSDDGTF 84 (130)
T ss_dssp HHHHHHHHHHHHHHTTCEEECCCCCCCSCCCHHHHHHHHHHHHHHHHHHHHHTC-CSEEEEEEEEETTEEEEEEEESSCC
T ss_pred HHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC-CCCCHHCCCCHHHHHHHCCCCCCCC
T ss_conf 334688999998640432278724776334704899999999999984553212-2110000012001110102333222
Q ss_pred CCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEEEC
Q ss_conf 4402458874054545789987204999999999709879999877992699999419
Q gi|254780891|r 158 ARFPEKFTQIVDGNVESTIDSHDIQFYYVILLAHENKIRLLPEIIDDHNVVLSALLEK 215 (215)
Q Consensus 158 i~~~e~~~~~~~~~~~~~~~g~GlGl~~~~~i~~~~gG~i~v~~~~~~g~~f~~~l~~ 215 (215)
|+ ++ +..|+|+||++++.+++.|||+|.++ .++|++|++.||+
T Consensus 85 i~-~~------------~~~g~GlGL~i~~~~~~~~gG~i~i~--s~~Gt~~~i~lP~ 127 (130)
T 3ehh_A 85 KG-EE------------NSFSKGHGLLGXRERLEFANGSLHID--TENGTKLTXAIPN 127 (130)
T ss_dssp CC---------------------CHHHHHHHHHHHTTCEEEEE--CSSSEEEEEEEEC
T ss_pred CC-CC------------CCCCCCCHHHHHHHHHHHCCCEEEEE--CCCCEEEEEEEEC
T ss_conf 22-56------------89999806999999999879889998--6998799999839