HHsearch results for GI: 254780891 and protein with PDBid: 1mu5_A

>1mu5_A Type II DNA topoisomerase VI subunit B; GHKL ATPase, helix two-turns helix; 2.00A {Sulfolobus shibatae} SCOP: a.156.1.3 d.14.1.3 d.122.1.2 PDB: 1mx0_A* 1z5b_A* 1z5a_A* 1z59_A* 1z5c_A* 2hkj_A*
Probab=99.33  E-value=9.5e-12  Score=93.12  Aligned_cols=95  Identities=9%  Similarity=0.056  Sum_probs=73.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHC---CCCCCCCC---CCCCEEEEEEECCCCCCCHHHHHHHHCCCCC------CCCCCC-
Q ss_conf             0123444567664687653200---11111235---5772047999878984402458874054545------789987-
Q gi|254780891|r  113 RERAKILLNLFMVAHASLPRGG---KVTISVQD---SKNENIFSLKINGNLARFPEKFTQIVDGNVE------STIDSH-  179 (215)
Q Consensus       113 ~~~~qvl~NLi~NA~~a~~~gg---~I~i~~~~---~~~~~~i~V~D~G~Gi~~~e~~~~~~~~~~~------~~~~g~-  179 (215)
                      ..+.+++.||+.||++|++.+|   .|.|.+..   .++.+.|.|+|+|+||+ ++.+.++|..++.      ....|. 
T Consensus        31 ~~l~~~v~ElV~NAiDa~~~~g~~p~I~I~I~~~~~~~~~~~I~V~DNG~GI~-~e~i~~iF~r~~~~sk~~~~~~~G~~  109 (471)
T 1mu5_A           31 RALYQTVRELIENSLDATDVHGILPNIKITIDLIDDARQIYKVNVVDNGIGIP-PQEVPNAFGRVLYSSKYVNRQTRGMY  109 (471)
T ss_dssp             HHHHHHHHHHHHHHHHTTGGGTCCCEEEEEEEEEETTTTEEEEEEECCSCCCC-GGGHHHHHHCCCCC-CCCCSCCSCSC
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCEEEEEEEECCCCCC-HHHHHHHHHHHCCCCCCCCCCCCCCC
T ss_conf             16999999999999997885599871699999736888689999996289999-99999986502625676650368962


Q ss_pred             CHHHHHHHHHHHHCCCE-EEEEEECCCCEE
Q ss_conf             20499999999970987-999987799269
Q gi|254780891|r  180 DIQFYYVILLAHENKIR-LLPEIIDDHNVV  208 (215)
Q Consensus       180 GlGl~~~~~i~~~~gG~-i~v~~~~~~g~~  208 (215)
                      ||||+.+..+++.|+|. +.|.|..+++.+
T Consensus       110 GlGl~~~~~~s~~~~G~~i~V~S~~~~~~~  139 (471)
T 1mu5_A          110 GLGVKAAVLYSQMHQDKPIEIETSPVNSKR  139 (471)
T ss_dssp             TTTHHHHHHHHHHHCCCCEEEEEECTTCSE
T ss_pred             CCCHHHHHHHHHHCCCCEEEEEEECCCCCE
T ss_conf             134899999999737946999994489973