HHsearch results for GI: 254780891 and protein with PDBid: 1mu5_A
>1mu5_A Type II DNA topoisomerase VI subunit B; GHKL ATPase, helix two-turns helix; 2.00A {Sulfolobus shibatae} SCOP: a.156.1.3 d.14.1.3 d.122.1.2 PDB: 1mx0_A* 1z5b_A* 1z5a_A* 1z59_A* 1z5c_A* 2hkj_A*
Probab=99.33 E-value=9.5e-12 Score=93.12 Aligned_cols=95 Identities=9% Similarity=0.056 Sum_probs=73.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHC---CCCCCCCC---CCCCEEEEEEECCCCCCCHHHHHHHHCCCCC------CCCCCC-
Q ss_conf 0123444567664687653200---11111235---5772047999878984402458874054545------789987-
Q gi|254780891|r 113 RERAKILLNLFMVAHASLPRGG---KVTISVQD---SKNENIFSLKINGNLARFPEKFTQIVDGNVE------STIDSH- 179 (215)
Q Consensus 113 ~~~~qvl~NLi~NA~~a~~~gg---~I~i~~~~---~~~~~~i~V~D~G~Gi~~~e~~~~~~~~~~~------~~~~g~- 179 (215)
..+.+++.||+.||++|++.+| .|.|.+.. .++.+.|.|+|+|+||+ ++.+.++|..++. ....|.
T Consensus 31 ~~l~~~v~ElV~NAiDa~~~~g~~p~I~I~I~~~~~~~~~~~I~V~DNG~GI~-~e~i~~iF~r~~~~sk~~~~~~~G~~ 109 (471)
T 1mu5_A 31 RALYQTVRELIENSLDATDVHGILPNIKITIDLIDDARQIYKVNVVDNGIGIP-PQEVPNAFGRVLYSSKYVNRQTRGMY 109 (471)
T ss_dssp HHHHHHHHHHHHHHHHTTGGGTCCCEEEEEEEEEETTTTEEEEEEECCSCCCC-GGGHHHHHHCCCCC-CCCCSCCSCSC
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCEEEEEEEECCCCCC-HHHHHHHHHHHCCCCCCCCCCCCCCC
T ss_conf 16999999999999997885599871699999736888689999996289999-99999986502625676650368962
Q ss_pred CHHHHHHHHHHHHCCCE-EEEEEECCCCEE
Q ss_conf 20499999999970987-999987799269
Q gi|254780891|r 180 DIQFYYVILLAHENKIR-LLPEIIDDHNVV 208 (215)
Q Consensus 180 GlGl~~~~~i~~~~gG~-i~v~~~~~~g~~ 208 (215)
||||+.+..+++.|+|. +.|.|..+++.+
T Consensus 110 GlGl~~~~~~s~~~~G~~i~V~S~~~~~~~ 139 (471)
T 1mu5_A 110 GLGVKAAVLYSQMHQDKPIEIETSPVNSKR 139 (471)
T ss_dssp TTTHHHHHHHHHHHCCCCEEEEEECTTCSE
T ss_pred CCCHHHHHHHHHHCCCCEEEEEEECCCCCE
T ss_conf 134899999999737946999994489973