HHsearch results for GI: 254780891 and protein with PDBid: 1pvg_A

>1pvg_A DNA topoisomerase II; GHKL ATPase domain; HET: DNA ANP; 1.80A {Saccharomyces cerevisiae} SCOP: d.14.1.3 d.122.1.2 PDB: 1qzr_A*
Probab=96.09  E-value=0.013  Score=35.19  Aligned_cols=78  Identities=13%  Similarity=0.179  Sum_probs=49.2

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCCCCCCEEEEEEECCCCCCCH----------HH-HHHHHCC-CC----
Q ss_conf             0012344456766468765320---0111112355772047999878984402----------45-8874054-54----
Q gi|254780891|r  112 SRERAKILLNLFMVAHASLPRG---GKVTISVQDSKNENIFSLKINGNLARFP----------EK-FTQIVDG-NV----  172 (215)
Q Consensus       112 ~~~~~qvl~NLi~NA~~a~~~g---g~I~i~~~~~~~~~~i~V~D~G~Gi~~~----------e~-~~~~~~~-~~----  172 (215)
                      ..-+.+++.-+|.||++..-.|   ..|.|.+..++  -.|+|+|+|.||+.+          |. |..+..+ .+    
T Consensus        62 ~~Gl~~l~~EildNavDe~~~g~~~~~I~V~i~~~d--gsisV~DnGrGIPv~~h~~~~~~~~E~i~t~LhaGgkfd~~~  139 (418)
T 1pvg_A           62 VPGLFKIFDEILVNAADNKVRDPSMKRIDVNIHAEE--HTIEVKNDGKGIPIEIHNKENIYIPEMIFGHLLTSSNYDDDE  139 (418)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHCTTCCEEEEEEETTT--TEEEEEEESSCCCCSBCTTTCSBHHHHHHHSSSEESCCCTTS
T ss_pred             CCEEEEEEEEEEECHHHHHHCCCCCCEEEEEEECCC--CEEEEEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCC
T ss_conf             660024656899980247651688877999996799--889999699014610436678641157887740355445775


Q ss_pred             -CCCCCCCCHHHHHHHHHHH
Q ss_conf             -5789987204999999999
Q gi|254780891|r  173 -ESTIDSHDIQFYYVILLAH  191 (215)
Q Consensus       173 -~~~~~g~GlGl~~~~~i~~  191 (215)
                       ....+.||+|..++-.+-+
T Consensus       140 yk~SGGlhGvGasvvNalS~  159 (418)
T 1pvg_A          140 KKVTGGRNGYGAKLCNIFST  159 (418)
T ss_dssp             CCCCSCCSSCHHHHHHHTEE
T ss_pred             CEECCCCCCCCHHHHHHHHH
T ss_conf             30407875526402276635