HHsearch results for GI: 254780891 and protein with PDBid: 1zxm_A

>1zxm_A TOPO IIA ATPase, DNA topoisomerase II, alpha isozyme; GHKL nucleotide-binding fold; HET: DNA ANP; 1.87A {Homo sapiens} PDB: 1zxn_A*
Probab=96.56  E-value=0.013  Score=35.06  Aligned_cols=83  Identities=14%  Similarity=0.119  Sum_probs=50.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHH---CCCCCCCCCCCCCEEEEEEECCCCCCCH---H----HHHHHH----CC-CCC----
Q ss_conf             012344456766468765320---0111112355772047999878984402---4----588740----54-545----
Q gi|254780891|r  113 RERAKILLNLFMVAHASLPRG---GKVTISVQDSKNENIFSLKINGNLARFP---E----KFTQIV----DG-NVE----  173 (215)
Q Consensus       113 ~~~~qvl~NLi~NA~~a~~~g---g~I~i~~~~~~~~~~i~V~D~G~Gi~~~---e----~~~~~~----~~-~~~----  173 (215)
                      .-+.+++.-++.||++..-.|   ..|.|++..+  .-.|+|+|+|.||+.+   +    ..+-+|    .+ .|.    
T Consensus        51 ~GL~~l~~EildNavDe~~~g~~~~~I~V~i~~d--~~sitV~DnGrGIPv~~h~~~~~~~~e~i~t~Lhaggkfd~~~y  128 (400)
T 1zxm_A           51 PGLYKIFDEILVNAADNKQRDPKMSCIRVTIDPE--NNLISIWNNGKGIPVVEHKVEKMYVPALIFGQLLTSSNYDDDEK  128 (400)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHCTTCCEEEEEEETT--TTEEEEEEESSCCCCSEETTTTEEHHHHHHHSSSEESCCCGGGC
T ss_pred             CEEEEEEEEEEECHHHHHHHCCCCCEEEEEEECC--CCEEEEEECCCCCCEEECCCCCCCCEEEEEEEECCCCCCCCCCC
T ss_conf             7005899899996554886557984799999779--99899998996532002156673210246778413156689862


Q ss_pred             -CCCCCCCHHHHHHHHHHHHCCCEEEEEE
Q ss_conf             -7899872049999999997098799998
Q gi|254780891|r  174 -STIDSHDIQFYYVILLAHENKIRLLPEI  201 (215)
Q Consensus       174 -~~~~g~GlGl~~~~~i~~~~gG~i~v~~  201 (215)
                       ...+.||+|..+|-.+-+    .+.|+.
T Consensus       129 k~sgGlhGVG~svvNalS~----~~~Vev  153 (400)
T 1zxm_A          129 KVTGGRNGYGAKLCNIFST----KFTVET  153 (400)
T ss_dssp             CCCSCCSSCHHHHHHHTEE----EEEEEE
T ss_pred             EEECCCCCCCHHHHHHCCH----HHEEEE
T ss_conf             3634644525255511034----114556