HHsearch results for GI: 254780891 and protein with PDBid: 1zxm_A
>1zxm_A TOPO IIA ATPase, DNA topoisomerase II, alpha isozyme; GHKL nucleotide-binding fold; HET: DNA ANP; 1.87A {Homo sapiens} PDB: 1zxn_A*
Probab=96.56 E-value=0.013 Score=35.06 Aligned_cols=83 Identities=14% Similarity=0.119 Sum_probs=50.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHH---CCCCCCCCCCCCCEEEEEEECCCCCCCH---H----HHHHHH----CC-CCC----
Q ss_conf 012344456766468765320---0111112355772047999878984402---4----588740----54-545----
Q gi|254780891|r 113 RERAKILLNLFMVAHASLPRG---GKVTISVQDSKNENIFSLKINGNLARFP---E----KFTQIV----DG-NVE---- 173 (215)
Q Consensus 113 ~~~~qvl~NLi~NA~~a~~~g---g~I~i~~~~~~~~~~i~V~D~G~Gi~~~---e----~~~~~~----~~-~~~---- 173 (215)
.-+.+++.-++.||++..-.| ..|.|++..+ .-.|+|+|+|.||+.+ + ..+-+| .+ .|.
T Consensus 51 ~GL~~l~~EildNavDe~~~g~~~~~I~V~i~~d--~~sitV~DnGrGIPv~~h~~~~~~~~e~i~t~Lhaggkfd~~~y 128 (400)
T 1zxm_A 51 PGLYKIFDEILVNAADNKQRDPKMSCIRVTIDPE--NNLISIWNNGKGIPVVEHKVEKMYVPALIFGQLLTSSNYDDDEK 128 (400)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCTTCCEEEEEEETT--TTEEEEEEESSCCCCSEETTTTEEHHHHHHHSSSEESCCCGGGC
T ss_pred CEEEEEEEEEEECHHHHHHHCCCCCEEEEEEECC--CCEEEEEECCCCCCEEECCCCCCCCEEEEEEEECCCCCCCCCCC
T ss_conf 7005899899996554886557984799999779--99899998996532002156673210246778413156689862
Q ss_pred -CCCCCCCHHHHHHHHHHHHCCCEEEEEE
Q ss_conf -7899872049999999997098799998
Q gi|254780891|r 174 -STIDSHDIQFYYVILLAHENKIRLLPEI 201 (215)
Q Consensus 174 -~~~~g~GlGl~~~~~i~~~~gG~i~v~~ 201 (215)
...+.||+|..+|-.+-+ .+.|+.
T Consensus 129 k~sgGlhGVG~svvNalS~----~~~Vev 153 (400)
T 1zxm_A 129 KVTGGRNGYGAKLCNIFST----KFTVET 153 (400)
T ss_dssp CCCSCCSSCHHHHHHHTEE----EEEEEE
T ss_pred EEECCCCCCCHHHHHHCCH----HHEEEE
T ss_conf 3634644525255511034----114556