HHsearch results for GI: 254780891 and protein with PDBid: 3d36_A
>3d36_A Sporulation kinase B; GHKL ATPase, four helix bundle, class I two-component histidine kinase, phosphoprotein; HET: ADP; 2.03A {Geobacillus stearothermophilus}
Probab=100.00 E-value=1.3e-40 Score=276.40 Aligned_cols=205 Identities=14% Similarity=0.165 Sum_probs=154.0
Q ss_pred HHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHCCCCH----HHHHHHHHHHHHHHHHHH----HHHCCCCCCCCCC
Q ss_conf 967687999--997745454227999999999996144301----478988899999999863----1100112232000
Q gi|254780891|r 9 LSSMDLVAL--LCSRICHDIISPIGAIHNSLELLDEVGIED----EVMQLIRLSSMSAIIRLK----FMRLAFGYTGSVD 78 (215)
Q Consensus 9 ~~~~~laal--las~IaHdlrtPL~~I~~~~elL~~~~~~~----~~~~~i~~~~~~~~~l~~----~~r~~~~~~~~~~ 78 (215)
+++.||+++ |+|+|||||||||++|.+++++|.+..... ++.+.+.+.+.++..+++ +.+.........+
T Consensus 6 ~qaekl~alg~l~a~isHElrtPLt~I~~~~~ll~~~~~~~~~~~~~~~~i~~~~~rl~~li~~ll~~~~~~~~~~~~~~ 85 (244)
T 3d36_A 6 IRAEKMEAVTHLAASISHEIRNPLTAARGFIQLIEEQPLAADKRRQYARIAIEELDRAEAIITDYLTFAKPAPETPEKLN 85 (244)
T ss_dssp EC---------CCCCHHHHHHHHHHHHHHHHHHGGGCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCSSCCCCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEC
T ss_conf 99999999999999999998679999999999997789986999999999999999999999999987276878971664
Q ss_pred CCCCCCHHHHHHHHHHHCCCCCCCCCCCC---CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECC
Q ss_conf 00000013444443220122332110000---001000123444567664687653200111112355772047999878
Q gi|254780891|r 79 SLIGLGDIEQVIEDFIAVDKRVQVSWTGE---KIDLSRERAKILLNLFMVAHASLPRGGKVTISVQDSKNENIFSLKING 155 (215)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~qvl~NLi~NA~~a~~~gg~I~i~~~~~~~~~~i~V~D~G 155 (215)
....+.++...+..... ...+.+..+.+ ...++..+.|++.||+.||++|+|.+|.|+|.+..+++++.|.|+|+|
T Consensus 86 l~~~i~~~~~~~~~~~~-~~~i~~~~~~~~~~v~~d~~~l~qvl~NLl~NAik~~~~~~~i~i~~~~~~~~v~i~V~D~G 164 (244)
T 3d36_A 86 VKLEIERVIDILRPLAN-MSCVDIQATLAPFSVIGEREKFRQCLLNVMKNAIEAMPNGGTLQVYVSIDNGRVLIRIADTG 164 (244)
T ss_dssp HHHHHHHHHHHHHHHHT-TTTEEEEEECCCCEEEECHHHHHHHHHHHHHHHHHTCTTCEEEEEEEEEETTEEEEEEEECS
T ss_pred HHHHHHHHHHHHHHHHH-HCCEEEEEECCCCEEEECHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCEEEEEEEECC
T ss_conf 99999999999999975-16859995079846997799999999999999998676897689999960888999999868
Q ss_pred CCCCCHHHHHHHHCCCCCCCC-CCCCHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEEEC
Q ss_conf 984402458874054545789-987204999999999709879999877992699999419
Q gi|254780891|r 156 NLARFPEKFTQIVDGNVESTI-DSHDIQFYYVILLAHENKIRLLPEIIDDHNVVLSALLEK 215 (215)
Q Consensus 156 ~Gi~~~e~~~~~~~~~~~~~~-~g~GlGl~~~~~i~~~~gG~i~v~~~~~~g~~f~~~l~~ 215 (215)
+||+ ++..+++|+||++++. +|+|||||+|+.|++.|||+|+++|.+++|++|+++||.
T Consensus 165 ~GI~-~e~~~~iFepF~~tk~~~GtGLGL~i~k~iv~~hgG~I~v~S~~~~Gt~f~i~lP~ 224 (244)
T 3d36_A 165 VGMT-KEQLERLGEPYFTTKGVKGTGLGMMVVYRIIESMNGTIRIESEIHKGTTVSIYLPL 224 (244)
T ss_dssp SCCC-HHHHHHTTSTTCCSSGGGCCSCHHHHHHHHHHHTTCEEEEEEETTTEEEEEEEEEC
T ss_pred CCCC-HHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEEEEC
T ss_conf 8989-89999866998658999964768999999999889979999669996699999878