HHsearch results for GI: 254780891 and protein with PDBid: 3h4l_A
>3h4l_A DNA mismatch repair protein PMS1; ATP binding, DNA repair, DNA damage, nucleus, phosphop DNA binding protein, protein binding; HET: DNA ANP; 2.50A {Saccharomyces cerevisiae}
Probab=97.40 E-value=0.00059 Score=43.62 Aligned_cols=82 Identities=11% Similarity=0.059 Sum_probs=54.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHCCCCCCCCC------------CCCH
Q ss_conf 1234445676646876532001111123557720479998789844024588740545457899------------8720
Q gi|254780891|r 114 ERAKILLNLFMVAHASLPRGGKVTISVQDSKNENIFSLKINGNLARFPEKFTQIVDGNVESTID------------SHDI 181 (215)
Q Consensus 114 ~~~qvl~NLi~NA~~a~~~gg~I~i~~~~~~~~~~i~V~D~G~Gi~~~e~~~~~~~~~~~~~~~------------g~Gl 181 (215)
...+++--|+.||++|. ...|.|.+.. ++.-.|.|.|+|.||. ++++...+....+.|.. -.|-
T Consensus 25 ~p~svvkELveNsiDA~--At~I~v~i~~-~g~~~i~V~DnG~Gi~-~~d~~~~~~r~~TSK~~~~~dl~~~~t~GfRGe 100 (367)
T 3h4l_A 25 DLTTAVKELVDNSIDAN--ANQIEIIFKD-YGLESIECSDNGDGID-PSNYEFLALKHYTSKIAKFQDVAKVQTLGFRGE 100 (367)
T ss_dssp SHHHHHHHHHHHHHHTT--CSEEEEEEET-TTTSEEEEEECSCCCC-GGGTTTTTCCEEC---------CCCCEEEETTH
T ss_pred CHHHHHHHHHHHHHCCC--CCEEEEEEEC-CCEEEEEEEECCCCCC-HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHH
T ss_conf 88999999997776489--5989999987-9846999998999889-789987654205875553223311246664407
Q ss_pred HHHHHHHHHHHCCCEEEEEEECC
Q ss_conf 49999999997098799998779
Q gi|254780891|r 182 QFYYVILLAHENKIRLLPEIIDD 204 (215)
Q Consensus 182 Gl~~~~~i~~~~gG~i~v~~~~~ 204 (215)
+|+-...+ +++.+.+...
T Consensus 101 AL~sI~~v-----s~l~I~S~~~ 118 (367)
T 3h4l_A 101 ALSSLCGI-----AKLSVITTTS 118 (367)
T ss_dssp HHHHHHHS-----SEEEEEEESS
T ss_pred HHHHHHHH-----CCEEEEEEEC
T ss_conf 89988752-----5647998505