HHsearch results for GI: 254780891 and protein with PDBid: 3jz3_A

>3jz3_A Sensor protein QSEC; helix-turn-helix, kinase domain, ATP-binding, cell inner MEM cell membrane, kinase, membrane, nucleotide-binding; 2.50A {Escherichia coli}
Probab=100.00  E-value=5.5e-34  Score=234.40  Aligned_cols=193  Identities=16%  Similarity=0.129  Sum_probs=135.0

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHCCCCH----HHHHH----HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHH-
Q ss_conf             997745454227999999999996144301----47898----889999999986311001122320000000001344-
Q gi|254780891|r   18 LCSRICHDIISPIGAIHNSLELLDEVGIED----EVMQL----IRLSSMSAIIRLKFMRLAFGYTGSVDSLIGLGDIEQ-   88 (215)
Q Consensus        18 las~IaHdlrtPL~~I~~~~elL~~~~~~~----~~~~~----i~~~~~~~~~l~~~~r~~~~~~~~~~~~~~~~~~~~-   88 (215)
                      +.+.|||||||||++|.++++++......+    +++..    +.+..+.+++++++.+...+............++.. 
T Consensus         5 F~a~iSHELrTPLt~I~~~~ell~~~~~~~~~~~~~l~~i~~~~~rl~~li~~lL~~sr~~~~~~~~~~~~~~l~~~~~~   84 (222)
T 3jz3_A            5 FTSDAAHELRSPLTALKVQTEVAQLSDDDPQARKKALLQLHSGIDRATRLVDQLLTLSRLDSLDNLQDVAEIPLEDLLQS   84 (222)
T ss_dssp             -----------------------------------CEECCC-CHHHHHHHHHHHHHHHTCCCSTTSTTCEEEEHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECHHHHHHH
T ss_conf             99999999828999999999998547999899999999999999999999999999987630556465444428999999


Q ss_pred             HHHHHH----HCCCCCCCCCCCC---CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCH
Q ss_conf             444322----0122332110000---001000123444567664687653200111112355772047999878984402
Q gi|254780891|r   89 VIEDFI----AVDKRVQVSWTGE---KIDLSRERAKILLNLFMVAHASLPRGGKVTISVQDSKNENIFSLKINGNLARFP  161 (215)
Q Consensus        89 ~~~~~~----~~~~~~~~~~~~~---~~~~~~~~~qvl~NLi~NA~~a~~~gg~I~i~~~~~~~~~~i~V~D~G~Gi~~~  161 (215)
                      .+..+.    .....+.+..+.+   ...++..+.|++.||+.||++|+|.++.|.|++...    .+.|+|+|+||+ +
T Consensus        85 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~d~~~l~~vl~NLl~NAikys~~~~~I~i~~~~~----~~~v~D~G~GI~-~  159 (222)
T 3jz3_A           85 SVMDIYHTAQQAKIDVRLTLNAHSIKRTGQPLLLSLLVRNLLDNAVRYSPQGSVVDVTLNAD----NFIVRDNGPGVT-P  159 (222)
T ss_dssp             HHHHHHHHHHHTTCEEEEEESSCSCEEEECHHHHHHHHHHHHHHHHHTCCTTCEEEEEECSS----EEEEECSCC-----
T ss_pred             HHHHHHHHHHHCCCEEEEECCCCCCEEECCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEE----EEEECCCCCCCC-H
T ss_conf             99999999997495799970776646832699999999999999998689996799999742----499835899989-9


Q ss_pred             HHHHHHHCCCCC---CCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEEEC
Q ss_conf             458874054545---789987204999999999709879999877992699999419
Q gi|254780891|r  162 EKFTQIVDGNVE---STIDSHDIQFYYVILLAHENKIRLLPEIIDDHNVVLSALLEK  215 (215)
Q Consensus       162 e~~~~~~~~~~~---~~~~g~GlGl~~~~~i~~~~gG~i~v~~~~~~g~~f~~~l~~  215 (215)
                      +...++|+||+.   ++.+|+|||||+|+.|++.|||+|+++|.+++|++|+++.++
T Consensus       160 e~~~~iFe~F~r~~~~~~~G~GLGL~Ivk~iv~~hgG~I~v~s~~~~Gt~f~i~F~E  216 (222)
T 3jz3_A          160 EALARIGERFYRPPGQTATGSGLGLSIVQRIAKLHGMNVEFGNAEQGGFEAKVSWLE  216 (222)
T ss_dssp             ----------------------CTHHHHHHHHHHTTCEEECCBCTTSSBEEEEECCC
T ss_pred             HHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCEEEEEEEEEC
T ss_conf             999986179741899999952678999999999839989999779898799999773