HHsearch results for GI: 254780891 and protein with PDBid: 3jz3_A
>3jz3_A Sensor protein QSEC; helix-turn-helix, kinase domain, ATP-binding, cell inner MEM cell membrane, kinase, membrane, nucleotide-binding; 2.50A {Escherichia coli}
Probab=100.00 E-value=5.5e-34 Score=234.40 Aligned_cols=193 Identities=16% Similarity=0.129 Sum_probs=135.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCH----HHHHH----HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHH-
Q ss_conf 997745454227999999999996144301----47898----889999999986311001122320000000001344-
Q gi|254780891|r 18 LCSRICHDIISPIGAIHNSLELLDEVGIED----EVMQL----IRLSSMSAIIRLKFMRLAFGYTGSVDSLIGLGDIEQ- 88 (215)
Q Consensus 18 las~IaHdlrtPL~~I~~~~elL~~~~~~~----~~~~~----i~~~~~~~~~l~~~~r~~~~~~~~~~~~~~~~~~~~- 88 (215)
+.+.|||||||||++|.++++++......+ +++.. +.+..+.+++++++.+...+............++..
T Consensus 5 F~a~iSHELrTPLt~I~~~~ell~~~~~~~~~~~~~l~~i~~~~~rl~~li~~lL~~sr~~~~~~~~~~~~~~l~~~~~~ 84 (222)
T 3jz3_A 5 FTSDAAHELRSPLTALKVQTEVAQLSDDDPQARKKALLQLHSGIDRATRLVDQLLTLSRLDSLDNLQDVAEIPLEDLLQS 84 (222)
T ss_dssp -----------------------------------CEECCC-CHHHHHHHHHHHHHHHTCCCSTTSTTCEEEEHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECHHHHHHH
T ss_conf 99999999828999999999998547999899999999999999999999999999987630556465444428999999
Q ss_pred HHHHHH----HCCCCCCCCCCCC---CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCH
Q ss_conf 444322----0122332110000---001000123444567664687653200111112355772047999878984402
Q gi|254780891|r 89 VIEDFI----AVDKRVQVSWTGE---KIDLSRERAKILLNLFMVAHASLPRGGKVTISVQDSKNENIFSLKINGNLARFP 161 (215)
Q Consensus 89 ~~~~~~----~~~~~~~~~~~~~---~~~~~~~~~qvl~NLi~NA~~a~~~gg~I~i~~~~~~~~~~i~V~D~G~Gi~~~ 161 (215)
.+..+. .....+.+..+.+ ...++..+.|++.||+.||++|+|.++.|.|++... .+.|+|+|+||+ +
T Consensus 85 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~d~~~l~~vl~NLl~NAikys~~~~~I~i~~~~~----~~~v~D~G~GI~-~ 159 (222)
T 3jz3_A 85 SVMDIYHTAQQAKIDVRLTLNAHSIKRTGQPLLLSLLVRNLLDNAVRYSPQGSVVDVTLNAD----NFIVRDNGPGVT-P 159 (222)
T ss_dssp HHHHHHHHHHHTTCEEEEEESSCSCEEEECHHHHHHHHHHHHHHHHHTCCTTCEEEEEECSS----EEEEECSCC-----
T ss_pred HHHHHHHHHHHCCCEEEEECCCCCCEEECCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEE----EEEECCCCCCCC-H
T ss_conf 99999999997495799970776646832699999999999999998689996799999742----499835899989-9
Q ss_pred HHHHHHHCCCCC---CCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEEEC
Q ss_conf 458874054545---789987204999999999709879999877992699999419
Q gi|254780891|r 162 EKFTQIVDGNVE---STIDSHDIQFYYVILLAHENKIRLLPEIIDDHNVVLSALLEK 215 (215)
Q Consensus 162 e~~~~~~~~~~~---~~~~g~GlGl~~~~~i~~~~gG~i~v~~~~~~g~~f~~~l~~ 215 (215)
+...++|+||+. ++.+|+|||||+|+.|++.|||+|+++|.+++|++|+++.++
T Consensus 160 e~~~~iFe~F~r~~~~~~~G~GLGL~Ivk~iv~~hgG~I~v~s~~~~Gt~f~i~F~E 216 (222)
T 3jz3_A 160 EALARIGERFYRPPGQTATGSGLGLSIVQRIAKLHGMNVEFGNAEQGGFEAKVSWLE 216 (222)
T ss_dssp ----------------------CTHHHHHHHHHHTTCEEECCBCTTSSBEEEEECCC
T ss_pred HHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCEEEEEEEEEC
T ss_conf 999986179741899999952678999999999839989999779898799999773