HHSEARCH alignment of GI: 254780891 and SCOP domain: d1b63a2

Alignment

Probab=97.21  E-value=0.0003  Score=44.02  Aligned_cols=59  Identities=12%  Similarity=0.218  Sum_probs=44.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHCCCCCCCC
Q ss_conf             123444567664687653200111112355772047999878984402458874054545789
Q gi|254780891|r  114 ERAKILLNLFMVAHASLPRGGKVTISVQDSKNENIFSLKINGNLARFPEKFTQIVDGNVESTI  176 (215)
Q Consensus       114 ~~~qvl~NLi~NA~~a~~~gg~I~i~~~~~~~~~~i~V~D~G~Gi~~~e~~~~~~~~~~~~~~  176 (215)
                      ...+++--|+.||++|..  ..|.|.+.. ++.-.|.|.|+|.||+ ++++.-.+..+.+.+.
T Consensus        24 ~~~~~vkELveNsiDA~A--t~I~V~i~~-~g~~~i~V~DnG~Gi~-~~d~~~~~~r~~TSKi   82 (218)
T d1b63a2          24 RPASVVKELVENSLDAGA--TRIDIDIER-GGAKLIRIRDNGCGIK-KDELALALARHATSKI   82 (218)
T ss_dssp             SHHHHHHHHHHHHHHTTC--SEEEEEEEG-GGTSEEEEEECSCCCC-GGGHHHHHSTTCCSSC
T ss_pred             CHHHHHHHHHHHHHCCCC--CEEEEEEEC-CCCCEEEEEECCCCCC-HHHHHHHHHCCCCCCC
T ss_conf             588999999864352799--889999985-9810899950777758-8888766754515566

SCOP domain information

class: Alpha and beta proteins (a+b)
fold: ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
superfamily: ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
family: DNA gyrase/MutL, N-terminal domain
domain: DNA mismatch repair protein MutL
species: Escherichia coli [TaxId: 562]