HHSEARCH alignment of GI: 254780891 and SCOP domain: d1ei1a2

Alignment
>d1ei1a2 d.122.1.2 (A:2-220) DNA gyrase B {Escherichia coli [TaxId: 562]}
Probab=96.27  E-value=0.014  Score=33.47  Aligned_cols=92  Identities=13%  Similarity=0.147  Sum_probs=55.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHH--CCCCCCCCCCCCCEEEEEEECCCCCCCH----------HH-HHHHHCC-CC-----C
Q ss_conf             012344456766468765320--0111112355772047999878984402----------45-8874054-54-----5
Q gi|254780891|r  113 RERAKILLNLFMVAHASLPRG--GKVTISVQDSKNENIFSLKINGNLARFP----------EK-FTQIVDG-NV-----E  173 (215)
Q Consensus       113 ~~~~qvl~NLi~NA~~a~~~g--g~I~i~~~~~~~~~~i~V~D~G~Gi~~~----------e~-~~~~~~~-~~-----~  173 (215)
                      ..+..++..+|.||++..-.+  ..|.|.+..++   .|+|+|+|.||+..          +. |..+..+ .+     .
T Consensus        33 ~gl~~l~~Eil~Na~De~~~~~~~~i~v~i~~dg---sIsV~ddGrGIPv~~h~~~~~~~~e~if~~l~tg~~fd~~~~~  109 (219)
T d1ei1a2          33 TGLHHMVFEVVDNAIDEALAGHCKEIIVTIHADN---SVSVQDDGRGIPTGIHPEEGVSAAEVIMTVLHAGGKFDDNSYK  109 (219)
T ss_dssp             HHHHHHHHHHHHHHHHHHHTTCCCEEEEEECTTS---CEEEEECSSCCCCSBCTTTSSBHHHHHHHSTTEESCSSSSSCS
T ss_pred             CCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCC---EEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCE
T ss_conf             5203436767643556640797662047892898---1999978755223316766986564363424301588887632


Q ss_pred             CCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEE
Q ss_conf             789987204999999999709879999877992699999
Q gi|254780891|r  174 STIDSHDIQFYYVILLAHENKIRLLPEIIDDHNVVLSAL  212 (215)
Q Consensus       174 ~~~~g~GlGl~~~~~i~~~~gG~i~v~~~~~~g~~f~~~  212 (215)
                      ...+.+|+|+.++--+.+    .+.|+...+ |-.++..
T Consensus       110 ~sgG~nGvG~~~~NalS~----~f~v~~~r~-g~~y~q~  143 (219)
T d1ei1a2         110 VSGGLHGVGVSVVNALSQ----KLELVIQRE-GKIHRQI  143 (219)
T ss_dssp             SCSCCSSCHHHHHHHTEE----EEEEEEEET-TEEEEEE
T ss_pred             EECCCCCCCEEEEEEEEE----EEEEEEEEC-CEEEEEE
T ss_conf             476756646247787613----899999989-9999999


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
superfamily: ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
family: DNA gyrase/MutL, N-terminal domain
domain: DNA gyrase B
species: Escherichia coli [TaxId: 562]