HHSEARCH alignment of GI: 254780891 and SCOP domain: d1i58a_

Alignment
>d1i58a_ d.122.1.3 (A:) Histidine kinase CheA {Thermotoga maritima [TaxId: 2336]}
Probab=99.31  E-value=2.5e-14  Score=108.06  Aligned_cols=92  Identities=8%  Similarity=-0.019  Sum_probs=62.6

Q ss_pred             HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHCCCCC-----CCCCCCCHHHHHHHHHHH
Q ss_conf             444567664687653200111112355772047999878984402458874054545-----789987204999999999
Q gi|254780891|r  117 KILLNLFMVAHASLPRGGKVTISVQDSKNENIFSLKINGNLARFPEKFTQIVDGNVE-----STIDSHDIQFYYVILLAH  191 (215)
Q Consensus       117 qvl~NLi~NA~~a~~~gg~I~i~~~~~~~~~~i~V~D~G~Gi~~~e~~~~~~~~~~~-----~~~~g~GlGl~~~~~i~~  191 (215)
                      +++.|+..|+..+.+.......     .......+.|.+.+. .++...++|++++.     ++.+|+|||||+|+.+++
T Consensus        91 ~i~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~-~~~~~~~~f~~~~~~~~~~~~~~G~GLGLai~k~ive  164 (189)
T d1i58a_          91 NVVIEVEDDGRGIDKEKIIRKA-----IEKGLIDESKAATLS-DQEILNFLFVPGFSTKEKVSEVSGRGVGMDVVKNVVE  164 (189)
T ss_dssp             EEEEEEEECSSCCCHHHHHHHH-----HHTTSSCHHHHTTCC-HHHHHGGGGSTTCSHHHHHHGGGTCCCHHHHHHHHHH
T ss_pred             EEEEEECCCCCCCCHHHHHCEE-----CCCEEEEECCCCCCH-HHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf             5999974784243601200000-----111023201455401-5566654401010003335667767428999999999


Q ss_pred             HCCCEEEEEEECCCCEEEEEEEE
Q ss_conf             70987999987799269999941
Q gi|254780891|r  192 ENKIRLLPEIIDDHNVVLSALLE  214 (215)
Q Consensus       192 ~~gG~i~v~~~~~~g~~f~~~l~  214 (215)
                      .|||+|+++|.+|+||+|+++||
T Consensus       165 ~hgG~I~v~S~~g~GT~f~i~lP  187 (189)
T d1i58a_         165 SLNGSISIESEKDKGTKVTIRLP  187 (189)
T ss_dssp             HTTCEEEEEEETTTEEEEEEEEE
T ss_pred             HCCCEEEEEECCCCCEEEEEEEE
T ss_conf             87998999953999779999995


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
superfamily: ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
family: Histidine kinase
domain: Histidine kinase CheA
species: Thermotoga maritima [TaxId: 2336]