HHSEARCH alignment of GI: 254780891 and SCOP domain: d1id0a_

Alignment
>d1id0a_ d.122.1.3 (A:) Histidine kinase PhoQ domain {Escherichia coli [TaxId: 562]}
Probab=99.92  E-value=3.9e-25  Score=176.62  Aligned_cols=105  Identities=9%  Similarity=0.022  Sum_probs=93.0

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHCCCCC--CCCCCCCHHHHH
Q ss_conf             001000123444567664687653200111112355772047999878984402458874054545--789987204999
Q gi|254780891|r  108 KIDLSRERAKILLNLFMVAHASLPRGGKVTISVQDSKNENIFSLKINGNLARFPEKFTQIVDGNVE--STIDSHDIQFYY  185 (215)
Q Consensus       108 ~~~~~~~~~qvl~NLi~NA~~a~~~gg~I~i~~~~~~~~~~i~V~D~G~Gi~~~e~~~~~~~~~~~--~~~~g~GlGl~~  185 (215)
                      ...++..+.|++.||+.||++|++.+  |+|++...++.+.|+|+|+|+||+ ++..+++|++|+.  +...|+|||||+
T Consensus        38 ~~~d~~~l~~vl~NLl~NAik~~~~~--i~i~~~~~~~~~~i~V~D~G~Gi~-~~~~~~iF~~F~r~~~~~~G~GLGL~I  114 (146)
T d1id0a_          38 FVGEQNDFVEVMGNVLDNACKYCLEF--VEISARQTDEHLYIVVEDDGPGIP-LSKREVIFDRGQRVDTLRPGQGVGLAV  114 (146)
T ss_dssp             EESCHHHHHHHHHHHHHHHHHHCSSE--EEEEEEECSSCEEEEEEESSSCCC-GGGTTGGGSCCCCTTCCCTTCCSCHHH
T ss_pred             EEECHHHHHHHHHHHHHHHHHHHCCC--EEEEEEEECCEEEEEEEEECCCCC-HHHHHHHCCCCCCCCCCCCCEEHHHHH
T ss_conf             99889999999999999999860098--899999609989999995079999-899999728963489998970379999


Q ss_pred             HHHHHHHCCCEEEEEEECCCCEEEEEEEEC
Q ss_conf             999999709879999877992699999419
Q gi|254780891|r  186 VILLAHENKIRLLPEIIDDHNVVLSALLEK  215 (215)
Q Consensus       186 ~~~i~~~~gG~i~v~~~~~~g~~f~~~l~~  215 (215)
                      |+.+++.|||+|+++|.+++|++|++.|||
T Consensus       115 ~k~iv~~h~G~i~~~s~~~~Gt~f~i~lP~  144 (146)
T d1id0a_         115 AREITEQYEGKIVAGESMLGGARMEVIFGR  144 (146)
T ss_dssp             HHHHHHHTTCEEEEEECTTSSEEEEEEECC
T ss_pred             HHHHHHHCCCEEEEEECCCCEEEEEEEEEC
T ss_conf             999999859989999749984699999948


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
superfamily: ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
family: Histidine kinase
domain: Histidine kinase PhoQ domain
species: Escherichia coli [TaxId: 562]