HHSEARCH alignment of GI: 254780891 and SCOP domain: d1joya_

Alignment

Probab=98.23  E-value=7.4e-07  Score=60.54  Aligned_cols=49  Identities=18%  Similarity=0.283  Sum_probs=36.7

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf             999977454542279999999999961443014789888999999998631
Q gi|254780891|r   16 ALLCSRICHDIISPIGAIHNSLELLDEVGIEDEVMQLIRLSSMSAIIRLKF   66 (215)
Q Consensus        16 allas~IaHdlrtPL~~I~~~~elL~~~~~~~~~~~~i~~~~~~~~~l~~~   66 (215)
                      ..+.+.|||||||||++|+++++++.++  .++..+.+.+.+.++..+++-
T Consensus        13 ~~f~~~vsHeLRTPLt~i~~~~e~l~~~--~~~~~~~i~~~~~rm~~li~d   61 (67)
T d1joya_          13 TLLMAGVSHDLRTPLTRIRLATEMMSEQ--DGYLAESINKDIEECNAIIEQ   61 (67)
T ss_dssp             HHHHTTTHHHHHHHHHHHHHHHHHHHHH--HTHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHC--CHHHHHHHHHHHHHHHHHHHH
T ss_conf             9999984488889999999998872333--699999999999999999999

SCOP domain information

class: All alpha proteins
fold: ROP-like
superfamily: Homodimeric domain of signal transducing histidine kinase
family: Homodimeric domain of signal transducing histidine kinase
domain: EnvZ histidine kinase
species: Escherichia coli [TaxId: 562]