HHSEARCH alignment of GI: 254780891 and SCOP domain: d1th8a_

Alignment
>d1th8a_ d.122.1.3 (A:) Anti-sigma factor spoIIab {Bacillus stearothermophilus [TaxId: 1422]}
Probab=99.39  E-value=7.3e-13  Score=98.69  Aligned_cols=92  Identities=11%  Similarity=0.023  Sum_probs=76.1

Q ss_pred             HHHHHHHHHHHHHHHHH---HHHCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHCCCCCCC--CCCCCHHHHHHHH
Q ss_conf             12344456766468765---320011111235577204799987898440245887405454578--9987204999999
Q gi|254780891|r  114 ERAKILLNLFMVAHASL---PRGGKVTISVQDSKNENIFSLKINGNLARFPEKFTQIVDGNVEST--IDSHDIQFYYVIL  188 (215)
Q Consensus       114 ~~~qvl~NLi~NA~~a~---~~gg~I~i~~~~~~~~~~i~V~D~G~Gi~~~e~~~~~~~~~~~~~--~~g~GlGl~~~~~  188 (215)
                      ++..++.+++.||++|.   +.++.|.|++...++.+.|.|+|+|+||+ +  ..+.|.|+++..  ..++|+||++++.
T Consensus        39 di~~av~E~v~Nai~ha~~~~~~~~I~i~~~~~~~~l~i~i~D~G~gi~-~--~~~~~~~~~~~~~~~~~~GlGL~iv~~  115 (139)
T d1th8a_          39 EIKTVVSEAVTNAIIHGYNNDPNGIVSISVIIEDGVVHLTVRDEGVGIP-D--IEEARQPLFTTKPELERSGMGFTIMEN  115 (139)
T ss_dssp             HHHHHHHHHHHHHHHTTSTTCTTSEEEEEEEEETTEEEEEEEECSSCCS-C--HHHHTCCC-------CCCSCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHEECCCCCCCEEEEEEEEECCEEEEEECCCCCCCC-C--CCCCCCCCCEECCCCCCCHHHHHHHHH
T ss_conf             9999998864436541237899957999999806899999823666624-5--123356652113568975378999998


Q ss_pred             HHHHCCCEEEEEEECCCCEEEEEE
Q ss_conf             999709879999877992699999
Q gi|254780891|r  189 LAHENKIRLLPEIIDDHNVVLSAL  212 (215)
Q Consensus       189 i~~~~gG~i~v~~~~~~g~~f~~~  212 (215)
                      +    .+++.+++.+++|++|+++
T Consensus       116 l----~d~i~i~s~~~~Gt~v~i~  135 (139)
T d1th8a_         116 F----MDEVIVESEVNKGTTVYLK  135 (139)
T ss_dssp             H----SSEEEEEEETTTEEEEEEE
T ss_pred             H----CCEEEEEECCCCCEEEEEE
T ss_conf             4----9889999749993899999


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
superfamily: ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
family: Histidine kinase
domain: Anti-sigma factor spoIIab
species: Bacillus stearothermophilus [TaxId: 1422]