HHsearch alignment for GI: 254780892 and conserved domain: COG0784

>COG0784 CheY FOG: CheY-like receiver [Signal transduction mechanisms].
Probab=99.76  E-value=5.2e-17  Score=121.74  Aligned_cols=117  Identities=29%  Similarity=0.415  Sum_probs=100.6

Q ss_pred             CEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHH-HHHHHHHHCCCCCEEEECCCCCCC--CHHHHHHHHCCCCCCCEEE
Q ss_conf             7799973998999999999998898999999979-999999717999489970789987--7389999614348897399
Q gi|254780892|r    2 DSLLLVDSSHIVRKVGRHLFNDFGFMVFEATSVC-EAREFCEKELLPNYLVIDESMEGV--LEFIAHVRQMPLGTDVFVY   78 (133)
Q Consensus         2 ~~ILiVDD~~~~r~~l~~~L~~~g~~v~~a~~g~-eAl~~~~~~~~pdlii~D~~mP~~--~~l~~~ir~~~~~~~~pii   78 (133)
T Consensus         6 ~~vLivdD~~~~~~~~~~~l~~~g~~v~~a~~~~~~al~~~~~~~~~dlii~D~~mp~~~G~~~~~~l~~~--~~~~pvv   83 (130)
T COG0784           6 LRVLVVDDEPVNRRLLKRLLEDLGYEVVEAADGEEEALELLRELPQPDLILLDINMPGMDGIELLRRLRAR--GPNIPVI   83 (130)
T ss_pred             CEEEEECCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHH--CCCCCEE
T ss_conf             88999789999999999999877978999578399999998627899999980688788889999999971--8999689


Q ss_pred             EEECCCCHHHHHHHHHCCCCEEEECCCCHHH-HHHHHHHHHHH
Q ss_conf             9963899899999997699889976989899-99999999999
Q gi|254780892|r   79 YLLMEVDFEKMIAGARAGANSFLLKPFNRET-LRFAMRELPQM  120 (133)
Q Consensus        79 ~lT~~~~~~~~~~a~~~Ga~~yl~KP~~~~~-L~~~i~~~~~~  120 (133)
T Consensus        84 ~~t~~~~~~~~~~~~~~g~~~~l~kP~~~~~~l~~~i~~~~~~  126 (130)
T COG0784          84 LLTAYADEADRERALAAGADDYLTKPIFLEEELLAALRRLLAR  126 (130)
T ss_pred             EEECCCCHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHH
T ss_conf             9986786765999997687689758998799999999999864