HHsearch alignment for GI: 254780892 and conserved domain: COG2204
>COG2204 AtoC Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms].
Probab=99.93 E-value=9e-25 Score=167.98 Aligned_cols=125 Identities=24% Similarity=0.337 Sum_probs=114.1
Q ss_pred CCEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCEEEECCCCCCCC--HHHHHHHHCCCCCCCEEE
Q ss_conf 977999739989999999999988989999999799999997179994899707899877--389999614348897399
Q gi|254780892|r 1 MDSLLLVDSSHIVRKVGRHLFNDFGFMVFEATSVCEAREFCEKELLPNYLVIDESMEGVL--EFIAHVRQMPLGTDVFVY 78 (133)
Q Consensus 1 m~~ILiVDD~~~~r~~l~~~L~~~g~~v~~a~~g~eAl~~~~~~~~pdlii~D~~mP~~~--~l~~~ir~~~~~~~~pii 78 (133)
T Consensus 4 ~~~iLvVDDd~~ir~~l~~~L~~~G~~v~~a~~~~~al~~i~~~-~~~lvl~Di~mp~~~Gl~ll~~i~~~--~~~~pVI 80 (464)
T COG2204 4 MARILVVDDDPDIRELLEQALELAGYEVVTAESAEEALEALSES-PFDLVLLDIRMPGMDGLELLKEIKSR--DPDLPVI 80 (464)
T ss_pred CCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCC-CCCEEEEECCCCCCCHHHHHHHHHHH--CCCCCEE
T ss_conf 68789992978999999999997697489858999999998628-99989981678999669999999963--8999889
Q ss_pred EEECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99638998999999976998899769898999999999999999999998
Q gi|254780892|r 79 YLLMEVDFEKMIAGARAGANSFLLKPFNRETLRFAMRELPQMQKSKDENQ 128 (133)
Q Consensus 79 ~lT~~~~~~~~~~a~~~Ga~~yl~KP~~~~~L~~~i~~~~~~~~~~~~~~ 128 (133)
T Consensus 81 ~~Tg~g~i~~AV~A~k~GA~Dfl~KP~~~~~L~~~v~ral~~~~~~~e~~ 130 (464)
T COG2204 81 VMTGHGDIDTAVEALRLGAFDFLEKPFDLDRLLAIVERALELRELQRENR 130 (464)
T ss_pred EEECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 98288999999999855703332189999999999999998765322210