HHsearch alignment for GI: 254780892 and conserved domain: COG4567

>COG4567 Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain [Signal transduction mechanisms / Transcription].
Probab=99.66  E-value=2.1e-15  Score=112.14  Aligned_cols=113  Identities=25%  Similarity=0.291  Sum_probs=102.7

Q ss_pred             CEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCEEEECCCCCCCC--HHHHHHHHCCCCCCCEEEE
Q ss_conf             77999739989999999999988989999999799999997179994899707899877--3899996143488973999
Q gi|254780892|r    2 DSLLLVDSSHIVRKVGRHLFNDFGFMVFEATSVCEAREFCEKELLPNYLVIDESMEGVL--EFIAHVRQMPLGTDVFVYY   79 (133)
Q Consensus         2 ~~ILiVDD~~~~r~~l~~~L~~~g~~v~~a~~g~eAl~~~~~~~~pdlii~D~~mP~~~--~l~~~ir~~~~~~~~pii~   79 (133)
T Consensus        10 ~~lllvdDD~~f~~~LaRa~e~RGf~v~~a~~~~eal~~art-~~PayAvvDlkL~~gsGL~~i~~lr~~--~~d~rivv   86 (182)
T COG4567          10 KSLLLVDDDTPFLRTLARAMERRGFAVVTAESVEEALAAART-APPAYAVVDLKLGDGSGLAVIEALRER--RADMRIVV   86 (182)
T ss_pred             CEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHC-CCCCEEEEEEEECCCCCHHHHHHHHHC--CCCCEEEE
T ss_conf             605896187699999999986068625761449999999851-798528898640688746899999824--97643898


Q ss_pred             EECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHH
Q ss_conf             96389989999999769988997698989999999999
Q gi|254780892|r   80 LLMEVDFEKMIAGARAGANSFLLKPFNRETLRFAMREL  117 (133)
Q Consensus        80 lT~~~~~~~~~~a~~~Ga~~yl~KP~~~~~L~~~i~~~  117 (133)
T Consensus        87 LTGy~sIATAV~AvKlGA~~YLaKPAdaDdi~aAl~~~  124 (182)
T COG4567          87 LTGYASIATAVEAVKLGACDYLAKPADADDILAALLRR  124 (182)
T ss_pred             EECCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHC
T ss_conf             84511799999999862455407977768999998602