HHsearch alignment for GI: 254780892 and conserved domain: COG4567
>COG4567 Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain [Signal transduction mechanisms / Transcription].
Probab=99.66 E-value=2.1e-15 Score=112.14 Aligned_cols=113 Identities=25% Similarity=0.291 Sum_probs=102.7
Q ss_pred CEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCEEEECCCCCCCC--HHHHHHHHCCCCCCCEEEE
Q ss_conf 77999739989999999999988989999999799999997179994899707899877--3899996143488973999
Q gi|254780892|r 2 DSLLLVDSSHIVRKVGRHLFNDFGFMVFEATSVCEAREFCEKELLPNYLVIDESMEGVL--EFIAHVRQMPLGTDVFVYY 79 (133)
Q Consensus 2 ~~ILiVDD~~~~r~~l~~~L~~~g~~v~~a~~g~eAl~~~~~~~~pdlii~D~~mP~~~--~l~~~ir~~~~~~~~pii~ 79 (133)
T Consensus 10 ~~lllvdDD~~f~~~LaRa~e~RGf~v~~a~~~~eal~~art-~~PayAvvDlkL~~gsGL~~i~~lr~~--~~d~rivv 86 (182)
T COG4567 10 KSLLLVDDDTPFLRTLARAMERRGFAVVTAESVEEALAAART-APPAYAVVDLKLGDGSGLAVIEALRER--RADMRIVV 86 (182)
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHC-CCCCEEEEEEEECCCCCHHHHHHHHHC--CCCCEEEE
T ss_conf 605896187699999999986068625761449999999851-798528898640688746899999824--97643898
Q ss_pred EECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHH
Q ss_conf 96389989999999769988997698989999999999
Q gi|254780892|r 80 LLMEVDFEKMIAGARAGANSFLLKPFNRETLRFAMREL 117 (133)
Q Consensus 80 lT~~~~~~~~~~a~~~Ga~~yl~KP~~~~~L~~~i~~~ 117 (133)
T Consensus 87 LTGy~sIATAV~AvKlGA~~YLaKPAdaDdi~aAl~~~ 124 (182)
T COG4567 87 LTGYASIATAVEAVKLGACDYLAKPADADDILAALLRR 124 (182)
T ss_pred EECCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHC
T ss_conf 84511799999999862455407977768999998602