HHsearch alignment for GI: 254780892 and conserved domain: COG4999
>COG4999 Uncharacterized domain of BarA-like signal transduction histidine kinases [Signal transduction mechanisms].
Probab=93.87 E-value=0.3 Score=27.86 Aligned_cols=106 Identities=9% Similarity=0.098 Sum_probs=69.6
Q ss_pred CEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCEEEECCCCCC---C-CHHHHHHHHCCCCCCCEE
Q ss_conf 779997399899999999999889899999997999999971799948997078998---7-738999961434889739
Q gi|254780892|r 2 DSLLLVDSSHIVRKVGRHLFNDFGFMVFEATSVCEAREFCEKELLPNYLVIDESMEG---V-LEFIAHVRQMPLGTDVFV 77 (133)
Q Consensus 2 ~~ILiVDD~~~~r~~l~~~L~~~g~~v~~a~~g~eAl~~~~~~~~pdlii~D~~mP~---~-~~l~~~ir~~~~~~~~pi 77 (133)
T Consensus 12 k~LayiEpNstAA~~t~~iL~~tpleVty-r~t---~~~lp~~hY-D~~Ll~vavtfr~n~tm~~~~l~~Al~mtd~-vi 85 (140)
T COG4999 12 KRLAYIEPNSTAAQCTLDILSETPLEVTY-RPT---FSALPPAHY-DMMLLGVAVTFRENLTMQHERLAKALSMTDF-VI 85 (140)
T ss_pred CEEEEECCCCHHHHHHHHHHHCCCCEEEE-CCC---CCCCCHHHH-CEEEECCCCCCCCCCHHHHHHHHHHHHHHCC-EE
T ss_conf 64577668608999999998468826884-233---100274452-0346536665568803889999999865313-67
Q ss_pred EEEECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHH
Q ss_conf 9996389989999999769988997698989999999
Q gi|254780892|r 78 YYLLMEVDFEKMIAGARAGANSFLLKPFNRETLRFAM 114 (133)
Q Consensus 78 i~lT~~~~~~~~~~a~~~Ga~~yl~KP~~~~~L~~~i 114 (133)
T Consensus 86 lalPs-~~qv~AeqLkQ~g~~~CllKPls~~rLlptl 121 (140)
T COG4999 86 LALPS-HAQVNAEQLKQDGAGACLLKPLSSTRLLPTL 121 (140)
T ss_pred EECCC-HHHHHHHHHHHCCHHHHHHCCCHHHHHHHHH
T ss_conf 73672-8887599996314286740765065667899