HHsearch alignment for GI: 254780892 and conserved domain: PRK09836

>PRK09836 DNA-binding transcriptional activator CusR; Provisional.
Probab=99.95  E-value=2.8e-26  Score=177.01  Aligned_cols=117  Identities=19%  Similarity=0.248  Sum_probs=108.0

Q ss_pred             EEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCEEEECCCCCCC--CHHHHHHHHCCCCCCCEEEEE
Q ss_conf             799973998999999999998898999999979999999717999489970789987--738999961434889739999
Q gi|254780892|r    3 SLLLVDSSHIVRKVGRHLFNDFGFMVFEATSVCEAREFCEKELLPNYLVIDESMEGV--LEFIAHVRQMPLGTDVFVYYL   80 (133)
Q Consensus         3 ~ILiVDD~~~~r~~l~~~L~~~g~~v~~a~~g~eAl~~~~~~~~pdlii~D~~mP~~--~~l~~~ir~~~~~~~~pii~l   80 (133)
T Consensus         2 kILiVEDd~~l~~~l~~~L~~~G~~v~~a~~g~~a~~~~~~-~~~DlvilDi~lP~~~G~~l~~~iR~~--~~~~PII~L   78 (226)
T PRK09836          2 KLLIVEDEKKTGEYLTKGLTEAGFVVDLADNGLNGYHLAMT-GDYDLIILDIMLPDVNGWDIVRMLRSA--NKGMPILLL   78 (226)
T ss_pred             EEEEEECCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHH-CCCCEEEECCCCCCCCCCCHHHHHHHH--CCCCEEEEE
T ss_conf             89999399999999999998789999998999999999851-899999988999999872043567761--679609999


Q ss_pred             ECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHH
Q ss_conf             638998999999976998899769898999999999999999
Q gi|254780892|r   81 LMEVDFEKMIAGARAGANSFLLKPFNRETLRFAMRELPQMQK  122 (133)
Q Consensus        81 T~~~~~~~~~~a~~~Ga~~yl~KP~~~~~L~~~i~~~~~~~~  122 (133)
T Consensus        79 ta~~~~~d~i~~l~~GADDYl~KPf~~~EL~aRi~allrr~~  120 (226)
T PRK09836         79 TALGTIEHRVKGLELGADDYLVKPFAFAELLARVRTLLRRGA  120 (226)
T ss_pred             ECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCCCC
T ss_conf             445898899999976996886368767999999999966266