HHsearch alignment for GI: 254780892 and conserved domain: PRK10403

>PRK10403 transcriptional regulator NarP; Provisional.
Probab=99.84  E-value=1.8e-19  Score=136.41  Aligned_cols=115  Identities=27%  Similarity=0.354  Sum_probs=103.0

Q ss_pred             CEEEEECCCHHHHHHHHHHHHH-CCCEE-EEECCHHHHHHHHHHCCCCCEEEECCCCCCC--CHHHHHHHHCCCCCCCEE
Q ss_conf             7799973998999999999998-89899-9999979999999717999489970789987--738999961434889739
Q gi|254780892|r    2 DSLLLVDSSHIVRKVGRHLFND-FGFMV-FEATSVCEAREFCEKELLPNYLVIDESMEGV--LEFIAHVRQMPLGTDVFV   77 (133)
Q Consensus         2 ~~ILiVDD~~~~r~~l~~~L~~-~g~~v-~~a~~g~eAl~~~~~~~~pdlii~D~~mP~~--~~l~~~ir~~~~~~~~pi   77 (133)
T Consensus         7 irIlIvDD~~l~r~gl~~~L~~~~~~~vv~~a~~~~~~~~~~~~-~~pDlvllD~~lp~~~G~~~~~~l~~~--~p~~~i   83 (215)
T PRK10403          7 FQVLIVDDHPLMRRGVRQLLELDPGFEVVAEAGDGASAIDLANR-LDIDVILLDLNMKGMSGLDTLNALRRD--GVTAQI   83 (215)
T ss_pred             CEEEEECCCHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHH-CCCCEEEECCCCCCCCCCCHHHHHHHC--CCCCCE
T ss_conf             57999839899999999999758992899998999999999864-499899980899899874123356541--887736


Q ss_pred             EEEECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHH
Q ss_conf             999638998999999976998899769898999999999999
Q gi|254780892|r   78 YYLLMEVDFEKMIAGARAGANSFLLKPFNRETLRFAMRELPQ  119 (133)
Q Consensus        78 i~lT~~~~~~~~~~a~~~Ga~~yl~KP~~~~~L~~~i~~~~~  119 (133)
T Consensus        84 ivlt~~~~~~~~~~al~~Ga~gyl~K~~~~~~l~~ai~~v~~  125 (215)
T PRK10403         84 IILTVSDASSDIFALIDAGADGYLLKDSDPEVLLEAIRAGAK  125 (215)
T ss_pred             EEEECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHC
T ss_conf             886324323678998746876688489999999999999984