HHsearch alignment for GI: 254780892 and conserved domain: PRK10403
>PRK10403 transcriptional regulator NarP; Provisional.
Probab=99.84 E-value=1.8e-19 Score=136.41 Aligned_cols=115 Identities=27% Similarity=0.354 Sum_probs=103.0
Q ss_pred CEEEEECCCHHHHHHHHHHHHH-CCCEE-EEECCHHHHHHHHHHCCCCCEEEECCCCCCC--CHHHHHHHHCCCCCCCEE
Q ss_conf 7799973998999999999998-89899-9999979999999717999489970789987--738999961434889739
Q gi|254780892|r 2 DSLLLVDSSHIVRKVGRHLFND-FGFMV-FEATSVCEAREFCEKELLPNYLVIDESMEGV--LEFIAHVRQMPLGTDVFV 77 (133)
Q Consensus 2 ~~ILiVDD~~~~r~~l~~~L~~-~g~~v-~~a~~g~eAl~~~~~~~~pdlii~D~~mP~~--~~l~~~ir~~~~~~~~pi 77 (133)
T Consensus 7 irIlIvDD~~l~r~gl~~~L~~~~~~~vv~~a~~~~~~~~~~~~-~~pDlvllD~~lp~~~G~~~~~~l~~~--~p~~~i 83 (215)
T PRK10403 7 FQVLIVDDHPLMRRGVRQLLELDPGFEVVAEAGDGASAIDLANR-LDIDVILLDLNMKGMSGLDTLNALRRD--GVTAQI 83 (215)
T ss_pred CEEEEECCCHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHH-CCCCEEEECCCCCCCCCCCHHHHHHHC--CCCCCE
T ss_conf 57999839899999999999758992899998999999999864-499899980899899874123356541--887736
Q ss_pred EEEECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHH
Q ss_conf 999638998999999976998899769898999999999999
Q gi|254780892|r 78 YYLLMEVDFEKMIAGARAGANSFLLKPFNRETLRFAMRELPQ 119 (133)
Q Consensus 78 i~lT~~~~~~~~~~a~~~Ga~~yl~KP~~~~~L~~~i~~~~~ 119 (133)
T Consensus 84 ivlt~~~~~~~~~~al~~Ga~gyl~K~~~~~~l~~ai~~v~~ 125 (215)
T PRK10403 84 IILTVSDASSDIFALIDAGADGYLLKDSDPEVLLEAIRAGAK 125 (215)
T ss_pred EEEECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHC
T ss_conf 886324323678998746876688489999999999999984