HHsearch alignment for GI: 254780892 and conserved domain: PRK10430

>PRK10430 DNA-binding transcriptional activator DcuR; Provisional.
Probab=99.94  E-value=3.2e-25  Score=170.70  Aligned_cols=122  Identities=20%  Similarity=0.310  Sum_probs=108.7

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHH-CCCEEE-EECCHHHHHHHHHH-CCCCCEEEECCCCCCC--CHHHHHHHHCCCCCCC
Q ss_conf             97799973998999999999998-898999-99997999999971-7999489970789987--7389999614348897
Q gi|254780892|r    1 MDSLLLVDSSHIVRKVGRHLFND-FGFMVF-EATSVCEAREFCEK-ELLPNYLVIDESMEGV--LEFIAHVRQMPLGTDV   75 (133)
Q Consensus         1 m~~ILiVDD~~~~r~~l~~~L~~-~g~~v~-~a~~g~eAl~~~~~-~~~pdlii~D~~mP~~--~~l~~~ir~~~~~~~~   75 (133)
T Consensus         1 MirVLIVEDD~~v~~~~~~~l~~~~gf~vv~~a~t~~eA~~~l~~~~~~~DLILLDi~mPd~~Glell~~lR~~--~~~~   78 (239)
T PRK10430          1 MINVLIVDDDAMVAELNRRYVAQIPGFQCCGTASTLEKAKEIIFNSDTPIDLILLDIYMQQENGLDLLPVLHEA--GCKS   78 (239)
T ss_pred             CCEEEEEECCHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHHH--CCCC
T ss_conf             98799992989999999999851899089999899999999996579998589978999999789999999985--8998


Q ss_pred             EEEEEECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             3999963899899999997699889976989899999999999999999
Q gi|254780892|r   76 FVYYLLMEVDFEKMIAGARAGANSFLLKPFNRETLRFAMRELPQMQKSK  124 (133)
Q Consensus        76 pii~lT~~~~~~~~~~a~~~Ga~~yl~KP~~~~~L~~~i~~~~~~~~~~  124 (133)
T Consensus        79 ~VI~ITa~~d~~~v~~Al~~Ga~DYLiKPf~~~rl~~~L~~y~~~~~~l  127 (239)
T PRK10430         79 DVIVISSAADAATIKDSLHYGVVDYLIKPFQASRFEEALTGWRQKKMAL  127 (239)
T ss_pred             EEEEEEECCCHHHHHHHHHCCCHHHEECCCCHHHHHHHHHHHHHHHHHH
T ss_conf             1999972688999999998395030489999999999999999999985