HHsearch alignment for GI: 254780892 and conserved domain: PRK10701
>PRK10701 DNA-binding transcriptional regulator RstA; Provisional.
Probab=99.95 E-value=4.1e-27 Score=181.93 Aligned_cols=120 Identities=15% Similarity=0.122 Sum_probs=109.4
Q ss_pred CCEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCEEEECCCCCCC--CHHHHHHHHCCCCCCCEEE
Q ss_conf 97799973998999999999998898999999979999999717999489970789987--7389999614348897399
Q gi|254780892|r 1 MDSLLLVDSSHIVRKVGRHLFNDFGFMVFEATSVCEAREFCEKELLPNYLVIDESMEGV--LEFIAHVRQMPLGTDVFVY 78 (133)
Q Consensus 1 m~~ILiVDD~~~~r~~l~~~L~~~g~~v~~a~~g~eAl~~~~~~~~pdlii~D~~mP~~--~~l~~~ir~~~~~~~~pii 78 (133)
T Consensus 1 M~kILlVEDd~~l~~~l~~~L~~~g~~v~~a~~g~~a~~~~~~-~~~DlvilDi~LP~~dG~~l~~~iR~~---~~~PiI 76 (240)
T PRK10701 1 MNTIVFVEDDAEVGSLIAAYLAKHDIDVTVEPRGDRAEETILR-EQPDLVLLDIMLPGKDGMTICRDLRPK---WSGPIV 76 (240)
T ss_pred CCEEEEEECCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHH-CCCCEEEEECCCCCCCCCEEEEECCCC---CCCCEE
T ss_conf 9989999799999999999998879999998999999999861-799999992899767887876311025---898789
Q ss_pred EEECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 9963899899999997699889976989899999999999999999
Q gi|254780892|r 79 YLLMEVDFEKMIAGARAGANSFLLKPFNRETLRFAMRELPQMQKSK 124 (133)
Q Consensus 79 ~lT~~~~~~~~~~a~~~Ga~~yl~KP~~~~~L~~~i~~~~~~~~~~ 124 (133)
T Consensus 77 ~lta~~~~~d~v~gl~~GADDYl~KPf~~~eL~aRi~a~lrr~~~~ 122 (240)
T PRK10701 77 LLTSLDSDMNHILALEMGACDYILKTTPPAVLLARLRLHLRQNEQA 122 (240)
T ss_pred EEEECCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHCCC
T ss_conf 9940575788999997688776417998799999999999653254