HHsearch alignment for GI: 254780892 and conserved domain: PRK11107
>PRK11107 hybrid sensory histidine kinase BarA; Provisional.
Probab=99.96 E-value=7.9e-28 Score=186.21 Aligned_cols=115 Identities=17% Similarity=0.181 Sum_probs=107.9
Q ss_pred EEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCEEEECCCCCCCC--HHHHHHHHCCCCCCCEEEEE
Q ss_conf 7999739989999999999988989999999799999997179994899707899877--38999961434889739999
Q gi|254780892|r 3 SLLLVDSSHIVRKVGRHLFNDFGFMVFEATSVCEAREFCEKELLPNYLVIDESMEGVL--EFIAHVRQMPLGTDVFVYYL 80 (133)
Q Consensus 3 ~ILiVDD~~~~r~~l~~~L~~~g~~v~~a~~g~eAl~~~~~~~~pdlii~D~~mP~~~--~l~~~ir~~~~~~~~pii~l 80 (133)
T Consensus 670 rVLvVEDN~iN~~vi~~lL~~lG~~v~~A~nG~eAle~~~~~~-fDLILMDiqMP~MDG~eATr~IR~~~~~~~~PIIAl 748 (920)
T PRK11107 670 TVMAVDDNPANLKLIGALLEEQVEHVVLCDSGHQAVELAKQRP-FDLIFMDIQMPGMDGIRACELIRQLPHNQNTPIIAV 748 (920)
T ss_pred EEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCC-CCEEEECCCCCCCCHHHHHHHHHHCCCCCCCEEEEE
T ss_conf 4999848899999999999984988999899999999974799-978998899999989999999981867898959999
Q ss_pred ECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHH
Q ss_conf 63899899999997699889976989899999999999
Q gi|254780892|r 81 LMEVDFEKMIAGARAGANSFLLKPFNRETLRFAMRELP 118 (133)
Q Consensus 81 T~~~~~~~~~~a~~~Ga~~yl~KP~~~~~L~~~i~~~~ 118 (133)
T Consensus 749 TA~a~~~dre~cl~aGMddyLtKPI~~~~L~~~L~~~~ 786 (920)
T PRK11107 749 TAHAMAGERERLLGAGMDDYLAKPIDEAALKQVLLRWK 786 (920)
T ss_pred ECCCCHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHC
T ss_conf 79989899999997799938728799999999999867