HHsearch alignment for GI: 254780892 and conserved domain: PRK13435
>PRK13435 response regulator; Provisional.
Probab=99.92 E-value=1.4e-23 Score=160.82 Aligned_cols=115 Identities=16% Similarity=0.218 Sum_probs=99.0
Q ss_pred CEEEEECCCHHHHHHHHHHHHHCCCEEE-EECCHHHHHHHHHHCCCCCEEEECCCCCCC---CHHHHHHHHCCCCCCCEE
Q ss_conf 7799973998999999999998898999-999979999999717999489970789987---738999961434889739
Q gi|254780892|r 2 DSLLLVDSSHIVRKVGRHLFNDFGFMVF-EATSVCEAREFCEKELLPNYLVIDESMEGV---LEFIAHVRQMPLGTDVFV 77 (133)
Q Consensus 2 ~~ILiVDD~~~~r~~l~~~L~~~g~~v~-~a~~g~eAl~~~~~~~~pdlii~D~~mP~~---~~l~~~ir~~~~~~~~pi 77 (133)
T Consensus 2 mRILIVEDe~~i~~~l~~~L~~~G~~vv~~A~~~~eAl~~~~~-~~PDlvllDi~LpdG~~G~e~~r~l~~---~~~ipv 77 (141)
T PRK13435 2 LRVLIVEDEALIALELEKLLEEAGHQVVGIASTSEQALALGRR-AQPDVALVDIRLADGPTGVEVARRLSI---DGGVEV 77 (141)
T ss_pred CEEEEECCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHC-CCCCEEEECCCCCCCCCHHHHHHHHHH---CCCCCE
T ss_conf 7899989989999999999998799799975999999999765-999899978878999989999999987---599838
Q ss_pred EEEECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHH
Q ss_conf 9996389989999999769988997698989999999999999999
Q gi|254780892|r 78 YYLLMEVDFEKMIAGARAGANSFLLKPFNRETLRFAMRELPQMQKS 123 (133)
Q Consensus 78 i~lT~~~~~~~~~~a~~~Ga~~yl~KP~~~~~L~~~i~~~~~~~~~ 123 (133)
T Consensus 78 I~lTa~~---d~~~~~~aGA~dyl~KPf~~~eL~~ai~~~~~rr~~ 120 (141)
T PRK13435 78 IFMTANP---ERVGHDFAGALGVIAKPYSLRQVARALSYVAARRVD 120 (141)
T ss_pred EEEECCH---HHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHCCC
T ss_conf 9997779---986013459985898999989999999999971568