HHsearch alignment for GI: 254780892 and conserved domain: PRK13856

>PRK13856 two-component response regulator VirG; Provisional.
Probab=99.94  E-value=2.4e-25  Score=171.44  Aligned_cols=118  Identities=16%  Similarity=0.244  Sum_probs=105.4

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCEEEECCCCCCC--CHHHHHHHHCCCCCCCEEE
Q ss_conf             97799973998999999999998898999999979999999717999489970789987--7389999614348897399
Q gi|254780892|r    1 MDSLLLVDSSHIVRKVGRHLFNDFGFMVFEATSVCEAREFCEKELLPNYLVIDESMEGV--LEFIAHVRQMPLGTDVFVY   78 (133)
Q Consensus         1 m~~ILiVDD~~~~r~~l~~~L~~~g~~v~~a~~g~eAl~~~~~~~~pdlii~D~~mP~~--~~l~~~ir~~~~~~~~pii   78 (133)
T Consensus         1 M~~ILlVEDD~~l~~~l~~~L~~~g~~v~~a~~~~~~~~~l~~-~~~DlvIlDi~lp~~~Gl~~~~~ir~~---~~~pii   76 (241)
T PRK13856          1 MKHVLVIDDDVAMRHLIVEYLTIHAFKVTAVADSQQFNRVLSS-ETVDVVVVDLNLGREDGLEIVRSLATK---SDVPII   76 (241)
T ss_pred             CCEEEEEECCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHC-CCCCEEEEECCCCCCCCHHHHHHHCCC---CCCCEE
T ss_conf             9989999698999999999998779999998999999999865-999999996999876613455564036---997369


Q ss_pred             EEEC-CCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHH
Q ss_conf             9963-8998999999976998899769898999999999999999
Q gi|254780892|r   79 YLLM-EVDFEKMIAGARAGANSFLLKPFNRETLRFAMRELPQMQK  122 (133)
Q Consensus        79 ~lT~-~~~~~~~~~a~~~Ga~~yl~KP~~~~~L~~~i~~~~~~~~  122 (133)
T Consensus        77 ilt~~~~~~~d~i~~l~~GADDYl~KPf~~~EL~aRi~~~lrr~~  121 (241)
T PRK13856         77 IISGDRLEEADKVVALELGATDFIAKPFGTREFLARIRVALRVRP  121 (241)
T ss_pred             EEECCCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHCC
T ss_conf             997267878999999876998899777677799999999987454