HHsearch alignment for GI: 254780892 and conserved domain: TIGR01387

>TIGR01387 cztR_silR_copR heavy metal response regulator; InterPro: IPR006291 Members of this family contain a response regulator receiver domain and an associated transcriptional regulatory region. This group is separated phylogenetically from related proteins with similar architecture and contains a number of proteins associated with heavy metal resistance efflux systems for copper, silver, cadmium, and/or zinc. Most members are encoded by genes adjacent to genes which code for a member of the heavy metal sensor histidine kinase family (IPR006290 from INTERPRO), its partner in the two-component response regulator system. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0000160 two-component signal transduction system (phosphorelay), 0007600 sensory perception.
Probab=99.93  E-value=6e-27  Score=180.98  Aligned_cols=121  Identities=20%  Similarity=0.345  Sum_probs=113.6

Q ss_pred             EEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCEEEECCCCCCCCH--HHHHHHHCCCCCCCEEEEEE
Q ss_conf             9997399899999999999889899999997999999971799948997078998773--89999614348897399996
Q gi|254780892|r    4 LLLVDSSHIVRKVGRHLFNDFGFMVFEATSVCEAREFCEKELLPNYLVIDESMEGVLE--FIAHVRQMPLGTDVFVYYLL   81 (133)
Q Consensus         4 ILiVDD~~~~r~~l~~~L~~~g~~v~~a~~g~eAl~~~~~~~~pdlii~D~~mP~~~~--l~~~ir~~~~~~~~pii~lT   81 (133)
T Consensus         1 iLvvEDeqkT~~YlqqGLsE~GYvvD~~~nG~DGL~lA~~~~Y-~liILDvmLPG~DGW~vl~~LR~~--~~~~PVl~LT   77 (219)
T TIGR01387         1 ILVVEDEQKTAEYLQQGLSESGYVVDIASNGRDGLHLAEKDDY-DLIILDVMLPGMDGWQVLKALRRS--GKETPVLFLT   77 (219)
T ss_pred             CEEEECCCCHHHHHHCCCCCCCEEEEEEECCCCHHHHCCCCCC-EEEEEECCCCCCCHHHHHHHHHCC--CCCCCEEEEE
T ss_conf             9676308602676530520123479887768624754368883-089963258895068999998407--8987348883


Q ss_pred             CCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             3899899999997699889976989899999999999999999999
Q gi|254780892|r   82 MEVDFEKMIAGARAGANSFLLKPFNRETLRFAMRELPQMQKSKDEN  127 (133)
Q Consensus        82 ~~~~~~~~~~a~~~Ga~~yl~KP~~~~~L~~~i~~~~~~~~~~~~~  127 (133)
T Consensus        78 A~D~v~DkvkGLd~GAdDYLvKPF~F~ELlARvR~~LR~~~~~~~~  123 (219)
T TIGR01387        78 ARDSVADKVKGLDLGADDYLVKPFEFAELLARVRTLLRRSESLEST  123 (219)
T ss_pred             CCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC
T ss_conf             3788454353011478654137877603799999876775203767