HHsearch alignment for GI: 254780892 and conserved domain: TIGR01387
>TIGR01387 cztR_silR_copR heavy metal response regulator; InterPro: IPR006291 Members of this family contain a response regulator receiver domain and an associated transcriptional regulatory region. This group is separated phylogenetically from related proteins with similar architecture and contains a number of proteins associated with heavy metal resistance efflux systems for copper, silver, cadmium, and/or zinc. Most members are encoded by genes adjacent to genes which code for a member of the heavy metal sensor histidine kinase family (IPR006290 from INTERPRO), its partner in the two-component response regulator system. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0000160 two-component signal transduction system (phosphorelay), 0007600 sensory perception.
Probab=99.93 E-value=6e-27 Score=180.98 Aligned_cols=121 Identities=20% Similarity=0.345 Sum_probs=113.6
Q ss_pred EEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCEEEECCCCCCCCH--HHHHHHHCCCCCCCEEEEEE
Q ss_conf 9997399899999999999889899999997999999971799948997078998773--89999614348897399996
Q gi|254780892|r 4 LLLVDSSHIVRKVGRHLFNDFGFMVFEATSVCEAREFCEKELLPNYLVIDESMEGVLE--FIAHVRQMPLGTDVFVYYLL 81 (133)
Q Consensus 4 ILiVDD~~~~r~~l~~~L~~~g~~v~~a~~g~eAl~~~~~~~~pdlii~D~~mP~~~~--l~~~ir~~~~~~~~pii~lT 81 (133)
T Consensus 1 iLvvEDeqkT~~YlqqGLsE~GYvvD~~~nG~DGL~lA~~~~Y-~liILDvmLPG~DGW~vl~~LR~~--~~~~PVl~LT 77 (219)
T TIGR01387 1 ILVVEDEQKTAEYLQQGLSESGYVVDIASNGRDGLHLAEKDDY-DLIILDVMLPGMDGWQVLKALRRS--GKETPVLFLT 77 (219)
T ss_pred CEEEECCCCHHHHHHCCCCCCCEEEEEEECCCCHHHHCCCCCC-EEEEEECCCCCCCHHHHHHHHHCC--CCCCCEEEEE
T ss_conf 9676308602676530520123479887768624754368883-089963258895068999998407--8987348883
Q ss_pred CCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 3899899999997699889976989899999999999999999999
Q gi|254780892|r 82 MEVDFEKMIAGARAGANSFLLKPFNRETLRFAMRELPQMQKSKDEN 127 (133)
Q Consensus 82 ~~~~~~~~~~a~~~Ga~~yl~KP~~~~~L~~~i~~~~~~~~~~~~~ 127 (133)
T Consensus 78 A~D~v~DkvkGLd~GAdDYLvKPF~F~ELlARvR~~LR~~~~~~~~ 123 (219)
T TIGR01387 78 ARDSVADKVKGLDLGADDYLVKPFEFAELLARVRTLLRRSESLEST 123 (219)
T ss_pred CCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC
T ss_conf 3788454353011478654137877603799999876775203767