HHsearch results for GI: 254780892 and protein with PDBid: 1dbw_A
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixation regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=99.94 E-value=2.8e-26 Score=175.65 Aligned_cols=117 Identities=21% Similarity=0.267 Sum_probs=107.9
Q ss_pred CC--EEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCEEEECCCCCCCC--HHHHHHHHCCCCCCCE
Q ss_conf 97--7999739989999999999988989999999799999997179994899707899877--3899996143488973
Q gi|254780892|r 1 MD--SLLLVDSSHIVRKVGRHLFNDFGFMVFEATSVCEAREFCEKELLPNYLVIDESMEGVL--EFIAHVRQMPLGTDVF 76 (133)
Q Consensus 1 m~--~ILiVDD~~~~r~~l~~~L~~~g~~v~~a~~g~eAl~~~~~~~~pdlii~D~~mP~~~--~l~~~ir~~~~~~~~p 76 (133)
|+ |||||||++..|..++..|+.+||+|..|.||++|++.+.+ ..||+|++|++||||. ++++++|.. .+++|
T Consensus 1 M~~~~ILiVDDd~~~r~~l~~~L~~~g~~v~~a~~~~~al~~~~~-~~~dlvi~D~~mP~~~G~~ll~~ir~~--~~~~p 77 (126)
T 1dbw_A 1 MQDYTVHIVDDEEPVRKSLAFMLTMNGFAVKMHQSAEAFLAFAPD-VRNGVLVTDLRMPDMSGVELLRNLGDL--KINIP 77 (126)
T ss_dssp CCCCEEEEEESSHHHHHHHHHHHHHTTCEEEEESCHHHHHHHGGG-CCSEEEEEECCSTTSCHHHHHHHHHHT--TCCCC
T ss_pred CCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHH-CCCCEEECCCCCCCCCCHHHHHHHHHH--CCCCE
T ss_conf 999989999699999999999999879999998999999999763-799879710368888829999999961--99983
Q ss_pred EEEEECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHH
Q ss_conf 99996389989999999769988997698989999999999999
Q gi|254780892|r 77 VYYLLMEVDFEKMIAGARAGANSFLLKPFNRETLRFAMRELPQM 120 (133)
Q Consensus 77 ii~lT~~~~~~~~~~a~~~Ga~~yl~KP~~~~~L~~~i~~~~~~ 120 (133)
+|++|++++.+...+|+++||++|+.|||+.+.|..++++++++
T Consensus 78 vI~lT~~~~~~~~~~a~~~Ga~dyl~KP~~~~~L~~~i~~a~~~ 121 (126)
T 1dbw_A 78 SIVITGHGDVPMAVEAMKAGAVDFIEKPFEDTVIIEAIERASEH 121 (126)
T ss_dssp EEEEECTTCHHHHHHHHHTTCSEEEESSCCHHHHHHHHHHHHTT
T ss_pred EEEEECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHH
T ss_conf 99996889999999999879988998969999999999999999