HHsearch results for GI: 254780892 and protein with PDBid: 1dc7_A
>1dc7_A NTRC, nitrogen regulation protein; receiver domain, phosphorylation, signal transduction, conformational rearrangement; NMR {Salmonella typhimurium} SCOP: c.23.1.1 PDB: 1j56_A 1krw_A 1krx_A 1ntr_A 1dc8_A*
Probab=99.91 E-value=3.1e-26 Score=175.38 Aligned_cols=119 Identities=18% Similarity=0.238 Sum_probs=109.2
Q ss_pred CC--EEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCEEEECCCCCCC--CHHHHHHHHCCCCCCCE
Q ss_conf 97--799973998999999999998898999999979999999717999489970789987--73899996143488973
Q gi|254780892|r 1 MD--SLLLVDSSHIVRKVGRHLFNDFGFMVFEATSVCEAREFCEKELLPNYLVIDESMEGV--LEFIAHVRQMPLGTDVF 76 (133)
Q Consensus 1 m~--~ILiVDD~~~~r~~l~~~L~~~g~~v~~a~~g~eAl~~~~~~~~pdlii~D~~mP~~--~~l~~~ir~~~~~~~~p 76 (133)
|+ +|||||||+.+|..++..|+.+||+|.+|.||.+|++.+.+ ..||+||+|++||++ .++++++|+. .+++|
T Consensus 1 M~k~~ILIVDDd~~~~~~l~~~L~~~g~~v~~a~~~~~a~~~l~~-~~~dlii~D~~lp~~~G~el~~~l~~~--~~~~p 77 (124)
T 1dc7_A 1 MQRGIVWVVDDDSSIRWVLERALAGAGLTCTTFENGNEVLAALAS-KTPDVLLSDIRMPGMDGLALLKQIKQR--HPMLP 77 (124)
T ss_dssp CCCCCCEEECSSSSHHHHHHHHHTTTTCCCEECCCTTHHHHHSSS-CCCSCEEECSCSSHHHHCSTHHHHHHH--CTTSC
T ss_pred CCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHH-CCCCEEEECCCCCCCCHHHHHHHHHHH--CCCCE
T ss_conf 998989999599999999999999889999998999999999983-899999875889998459999999985--89991
Q ss_pred EEEEECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHH
Q ss_conf 9999638998999999976998899769898999999999999999
Q gi|254780892|r 77 VYYLLMEVDFEKMIAGARAGANSFLLKPFNRETLRFAMRELPQMQK 122 (133)
Q Consensus 77 ii~lT~~~~~~~~~~a~~~Ga~~yl~KP~~~~~L~~~i~~~~~~~~ 122 (133)
|+++|++++.+...+|++.|+++|+.|||+.++|..++++++++++
T Consensus 78 ii~~t~~~~~~~~~~a~~~G~~dyl~KP~~~~~L~~~i~~~l~~~~ 123 (124)
T 1dc7_A 78 VIIMTAHSDLDAAVSAYQQGAFDYLPKPFDIDEAVALVERAISHYQ 123 (124)
T ss_dssp CCCBCCSTTSTTTTSSCTTCCCCCBCSSCCHHHHHHHHHHHHHHTC
T ss_pred EEEEECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHC
T ss_conf 9999898999999999986998078397999999999999999844