HHsearch results for GI: 254780892 and protein with PDBid: 1kgs_A
>1kgs_A DRRD, DNA binding response regulator D; DNA-binding protein, ALPH-beta sandwich, winged-helix, helix-turn-helix, DNA binding protein; HET: DNA MSE; 1.50A {Thermotoga maritima} SCOP: a.4.6.1 c.23.1.1
Probab=99.91 E-value=1.4e-23 Score=159.61 Aligned_cols=118 Identities=21% Similarity=0.238 Sum_probs=106.7
Q ss_pred CC-EEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCEEEECCCCCCCC--HHHHHHHHCCCCCCCEE
Q ss_conf 97-7999739989999999999988989999999799999997179994899707899877--38999961434889739
Q gi|254780892|r 1 MD-SLLLVDSSHIVRKVGRHLFNDFGFMVFEATSVCEAREFCEKELLPNYLVIDESMEGVL--EFIAHVRQMPLGTDVFV 77 (133)
Q Consensus 1 m~-~ILiVDD~~~~r~~l~~~L~~~g~~v~~a~~g~eAl~~~~~~~~pdlii~D~~mP~~~--~l~~~ir~~~~~~~~pi 77 (133)
|+ |||||||++..+..+...|+..||+|..|.||.+|++.+.++ .||+||+|+.||++. ++++.+|+. .+.+||
T Consensus 1 M~~rILiVeDd~~~~~~l~~~L~~~g~~V~~a~~~~ea~~~~~~~-~~dliilD~~lp~~~g~~~~~~ir~~--~~~~pi 77 (225)
T 1kgs_A 1 MNVRVLVVEDERDLADLITEALKKEMFTVDVCYDGEEGMYMALNE-PFDVVILDIMLPVHDGWEILKSMRES--GVNTPV 77 (225)
T ss_dssp -CCEEEEECSSHHHHHHHHHHHHHTTCEEEEESSHHHHHHHHHHS-CCSEEEEESCCSSSCHHHHHHHHHHT--TCCCCE
T ss_pred CCCEEEEEECCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHC-CCCEEEEECCCCCCCCCCHHHHHHCC--CCCCCE
T ss_conf 996199992999999999999998799999989999999999728-99899994677654310101221113--456753
Q ss_pred EEEECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHH
Q ss_conf 99963899899999997699889976989899999999999999
Q gi|254780892|r 78 YYLLMEVDFEKMIAGARAGANSFLLKPFNRETLRFAMRELPQMQ 121 (133)
Q Consensus 78 i~lT~~~~~~~~~~a~~~Ga~~yl~KP~~~~~L~~~i~~~~~~~ 121 (133)
|++|+.++.+...+++++||+||+.|||+.++|..+++...+..
T Consensus 78 i~ls~~~~~~~~~~~l~~Gaddyl~KP~~~~eL~a~i~~~~~~~ 121 (225)
T 1kgs_A 78 LMLTALSDVEYRVKGLNMGADDYLPKPFDLRELIARVRALIRRK 121 (225)
T ss_dssp EEEESSCHHHHHHHTCCCCCSEEEESSCCHHHHHHHHHHHHHHH
T ss_pred EECCCCCCHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHCC
T ss_conf 20233441678999997799852458999999999999997113