HHsearch results for GI: 254780892 and protein with PDBid: 1y80_A
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=95.04 E-value=0.06 Score=30.68 Aligned_cols=90 Identities=14% Similarity=0.073 Sum_probs=59.8
Q ss_pred HHHHHHHHHHHHHCCCEEEEE--CCH-HHHHHHHHHCCCCCEEEECCCCCCC----CHHHHHHHHCCCCCCCEEEEEECC
Q ss_conf 899999999999889899999--997-9999999717999489970789987----738999961434889739999638
Q gi|254780892|r 11 HIVRKVGRHLFNDFGFMVFEA--TSV-CEAREFCEKELLPNYLVIDESMEGV----LEFIAHVRQMPLGTDVFVYYLLME 83 (133)
Q Consensus 11 ~~~r~~l~~~L~~~g~~v~~a--~~g-~eAl~~~~~~~~pdlii~D~~mP~~----~~l~~~ir~~~~~~~~pii~lT~~ 83 (133)
..-..++..+|+..||+|... ..+ ++-++.+.+ ..||+|.+...|+.. -+++..+|+....+++||++ -|.
T Consensus 102 ~lG~~~va~~l~~~Gw~V~~LG~~vp~e~l~~~~~~-~~~~~v~lS~~~~~~~~~~~~~i~~l~~~~~~~~v~i~v-GG~ 179 (210)
T 1y80_A 102 DIGKNLVAMMLESGGFTVYNLGVDIEPGKFVEAVKK-YQPDIVGMSALLTTTMMNMKSTIDALIAAGLRDRVKVIV-GGA 179 (210)
T ss_dssp CHHHHHHHHHHHHTTCEEEECCSSBCHHHHHHHHHH-HCCSEEEEECCSGGGTHHHHHHHHHHHHTTCGGGCEEEE-EST
T ss_pred HHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHH-CCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCEEEE-ECC
T ss_conf 899999999999889848856789999999999985-299999998435677999999999999848999996999-892
Q ss_pred CCHHHHHHHHHCCCCEEEECC
Q ss_conf 998999999976998899769
Q gi|254780892|r 84 VDFEKMIAGARAGANSFLLKP 104 (133)
Q Consensus 84 ~~~~~~~~a~~~Ga~~yl~KP 104 (133)
.-. ..-+-..||+.|-.-+
T Consensus 180 ~~~--~~~a~~~GaD~~a~da 198 (210)
T 1y80_A 180 PLS--QDFADEIGADGYAPDA 198 (210)
T ss_dssp TCC--HHHHHHHTCSEECSSH
T ss_pred CCC--HHHHHHHCCCEEECCH
T ss_conf 089--9999993998897899