HHsearch results for GI: 254780892 and protein with PDBid: 1ys7_A
>1ys7_A Transcriptional regulatory protein PRRA; response regulator, DNA binding domain, phosphorylation; 1.58A {Mycobacterium tuberculosis} SCOP: a.4.6.1 c.23.1.1 PDB: 1ys6_A
Probab=99.92 E-value=3.6e-24 Score=163.13 Aligned_cols=118 Identities=25% Similarity=0.305 Sum_probs=105.7
Q ss_pred CEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCEEEECCCCCCCCHH--HHHHHHCCCCCCCEEEE
Q ss_conf 7799973998999999999998898999999979999999717999489970789987738--99996143488973999
Q gi|254780892|r 2 DSLLLVDSSHIVRKVGRHLFNDFGFMVFEATSVCEAREFCEKELLPNYLVIDESMEGVLEF--IAHVRQMPLGTDVFVYY 79 (133)
Q Consensus 2 ~~ILiVDD~~~~r~~l~~~L~~~g~~v~~a~~g~eAl~~~~~~~~pdlii~D~~mP~~~~l--~~~ir~~~~~~~~pii~ 79 (133)
.|||||||++..+..++..|+..||+|..|.||.+|++.+.++ .||+|++|+.||++.++ +..+| ...+.+|+++
T Consensus 8 pkILiVeDd~~~~~~l~~~L~~~g~~V~~a~~~~ea~~~~~~~-~~dlvilD~~lp~~~g~~~~~~~r--~~~~~~~iii 84 (233)
T 1ys7_A 8 PRVLVVDDDSDVLASLERGLRLSGFEVATAVDGAEALRSATEN-RPDAIVLDINMPVLDGVSVVTALR--AMDNDVPVCV 84 (233)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTCEEEEESSHHHHHHHHHHS-CCSEEEEESSCSSSCHHHHHHHHH--HTTCCCCEEE
T ss_pred CEEEEEECCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHC-CCCEEEEECCCCCCCCCCEEEECC--CCCCCCCEEC
T ss_conf 8799997999999999999997899999989999999999747-997897522387556862231012--3577762331
Q ss_pred EECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHH
Q ss_conf 9638998999999976998899769898999999999999999
Q gi|254780892|r 80 LLMEVDFEKMIAGARAGANSFLLKPFNRETLRFAMRELPQMQK 122 (133)
Q Consensus 80 lT~~~~~~~~~~a~~~Ga~~yl~KP~~~~~L~~~i~~~~~~~~ 122 (133)
+|++++.+...+|+++||+||+.|||+.++|..+++.+....+
T Consensus 85 lt~~~~~~~~v~al~~GAddyl~KP~~~~eL~a~i~~~~~~~~ 127 (233)
T 1ys7_A 85 LSARSSVDDRVAGLEAGADDYLVKPFVLAELVARVKALLRRRG 127 (233)
T ss_dssp EECCCTTTCCCTTTTTTCSEEEESSCCHHHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHH
T ss_conf 4566889999999977992999789987999999999998640