HHsearch results for GI: 254780892 and protein with PDBid: 3c3m_A
>3c3m_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein structure initiative; HET: MSE; 1.70A {Methanoculleus marisnigri JR1}
Probab=99.96 E-value=1.2e-28 Score=189.83 Aligned_cols=125 Identities=20% Similarity=0.214 Sum_probs=116.2
Q ss_pred CCEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCEEEECCCCCCC--CHHHHHHHHCCCCCCCEEE
Q ss_conf 97799973998999999999998898999999979999999717999489970789987--7389999614348897399
Q gi|254780892|r 1 MDSLLLVDSSHIVRKVGRHLFNDFGFMVFEATSVCEAREFCEKELLPNYLVIDESMEGV--LEFIAHVRQMPLGTDVFVY 78 (133)
Q Consensus 1 m~~ILiVDD~~~~r~~l~~~L~~~g~~v~~a~~g~eAl~~~~~~~~pdlii~D~~mP~~--~~l~~~ir~~~~~~~~pii 78 (133)
|+||||||||+.+|..+++.|+.+||+|.+|.||.+|++.+.+ ..||+||+|+.||++ +++++++|+.+.++++|||
T Consensus 3 ~~rILIVDD~~~~~~~l~~~L~~~G~~v~~a~~g~eal~~l~~-~~pdliilD~~mP~~dG~el~~~ir~~~~~~~ipvI 81 (138)
T 3c3m_A 3 LYTILVVDDSPMIVDVFVTMLERGGYRPITAFSGEECLEALNA-TPPDLVLLDIMMEPMDGWETLERIKTDPATRDIPVL 81 (138)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHHTTCEEEEESSHHHHHHHHHH-SCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEE
T ss_pred CCEEEEEECCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHC-CCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCCCEE
T ss_conf 8989999799999999999999879999998999999999753-899899970678999889999999848655899879
Q ss_pred EEECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 996389989999999769988997698989999999999999999999
Q gi|254780892|r 79 YLLMEVDFEKMIAGARAGANSFLLKPFNRETLRFAMRELPQMQKSKDE 126 (133)
Q Consensus 79 ~lT~~~~~~~~~~a~~~Ga~~yl~KP~~~~~L~~~i~~~~~~~~~~~~ 126 (133)
++|++++.+...+++.+|+++|+.|||++++|..++++++++++....
T Consensus 82 ~ls~~~~~~~~~~~~~~G~~d~l~KP~~~~~L~~~l~~~l~r~~~~~a 129 (138)
T 3c3m_A 82 MLTAKPLTPEEANEYGSYIEDYILKPTTHHQLYEAIEHVLARRHSIAA 129 (138)
T ss_dssp EEESSCCCHHHHHHTTTTCSEEEECCCHHHHHHHHHHHHHSCC-----
T ss_pred EEECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 986379899999998679988998989999999999999996520554