HHsearch results for GI: 254780892 and protein with PDBid: 3c97_A
>3c97_A Signal transduction histidine kinase; structural genomics, signaling, PSI-2, protein structure initiative; 1.70A {Aspergillus oryzae RIB40}
Probab=99.91 E-value=4.8e-24 Score=162.36 Aligned_cols=115 Identities=15% Similarity=0.140 Sum_probs=100.6
Q ss_pred CEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCEEEECCCCCCCC--HHHHHHHHC---CCCCCCE
Q ss_conf 77999739989999999999988989999999799999997179994899707899877--389999614---3488973
Q gi|254780892|r 2 DSLLLVDSSHIVRKVGRHLFNDFGFMVFEATSVCEAREFCEKELLPNYLVIDESMEGVL--EFIAHVRQM---PLGTDVF 76 (133)
Q Consensus 2 ~~ILiVDD~~~~r~~l~~~L~~~g~~v~~a~~g~eAl~~~~~~~~pdlii~D~~mP~~~--~l~~~ir~~---~~~~~~p 76 (133)
.||||||||+.+|..++++|+.+||+|.+|.||.+|++.+.++ .||+||+|++||+|. ++++.+|+. ...+.+|
T Consensus 11 l~VLiVDD~~~~r~~l~~~L~~~g~~v~~a~~g~eAl~~~~~~-~~dlii~D~~mP~~dG~el~~~ir~~~~~~~~~~ip 89 (140)
T 3c97_A 11 LSVLIAEDNDICRLVAAKALEKCTNDITVVTNGLQALQAYQNR-QFDVIIMDIQMPVMDGLEAVSEIRNYERTHNTKRAS 89 (140)
T ss_dssp CEEEEECCCHHHHHHHHHHHTTTCSEEEEESSHHHHHHHHHHS-CCSEEEECTTCCSSCHHHHHHHHHHHHHHHTCCCCC
T ss_pred CEEEEEECCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHC-CCCEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCE
T ss_conf 9899993989999999999998799999989999999998707-998899947999989999999998352103789983
Q ss_pred EEEEECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHH
Q ss_conf 99996389989999999769988997698989999999999999
Q gi|254780892|r 77 VYYLLMEVDFEKMIAGARAGANSFLLKPFNRETLRFAMRELPQM 120 (133)
Q Consensus 77 ii~lT~~~~~~~~~~a~~~Ga~~yl~KP~~~~~L~~~i~~~~~~ 120 (133)
|+++|+++..+.. ..+|+++|+.|||++++|..++.++...
T Consensus 90 ii~~ta~~~~~~~---~~ag~~~~l~KP~~~~~L~~~i~~~~~~ 130 (140)
T 3c97_A 90 IIAITADTIDDDR---PGAELDEYVSKPLNPNQLRDVVLTCHSE 130 (140)
T ss_dssp CEEEESSCCSCCC---CCSSCSEEEESSCCHHHHHHHHHHHHC-
T ss_pred EEEEECCCCHHHH---HHCCCCEEEECCCCHHHHHHHHHHHHHC
T ss_conf 9999899629999---8579988998989999999999999745