HHsearch results for GI: 254780892 and protein with PDBid: 3cnb_A

>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structure initiative, PSI-2; 2.00A {Colwellia psychrerythraea 34H}
Probab=99.96  E-value=1.4e-27  Score=183.39  Aligned_cols=123  Identities=15%  Similarity=0.254  Sum_probs=113.5

Q ss_pred             EEEEECCCHHHHHHHHHHHHH--CCCEEEEECCHHHHHHHHHHCCCCCEEEECCCCCCC--CHHHHHHHHCCCCCCCEEE
Q ss_conf             799973998999999999998--898999999979999999717999489970789987--7389999614348897399
Q gi|254780892|r    3 SLLLVDSSHIVRKVGRHLFND--FGFMVFEATSVCEAREFCEKELLPNYLVIDESMEGV--LEFIAHVRQMPLGTDVFVY   78 (133)
Q Consensus         3 ~ILiVDD~~~~r~~l~~~L~~--~g~~v~~a~~g~eAl~~~~~~~~pdlii~D~~mP~~--~~l~~~ir~~~~~~~~pii   78 (133)
                      ||||||||+.+|+.++..|+.  .|++|..|.||.+|++.+.+ ..||+||+|+.||++  +++++++|+.+..+++|||
T Consensus        10 ~ILiVDD~~~~~~~l~~~L~~~~~~~~v~~a~~g~eAl~~~~~-~~pDlillD~~mP~~dG~el~~~ir~~~~~~~ipvI   88 (143)
T 3cnb_A           10 SILIIEDDKEFADMLTQFLENLFPYAKIKIAYNPFDAGDLLHT-VKPDVVMLDLMMVGMDGFSICHRIKSTPATANIIVI   88 (143)
T ss_dssp             EEEEECSCHHHHHHHHHHHHHHCTTCEEEEECSHHHHHHHHHH-TCCSEEEEETTCTTSCHHHHHHHHHTSTTTTTSEEE
T ss_pred             EEEEEECCHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHH-CCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCCEEE
T ss_conf             9999919999999999999827898089998999999999972-799999980888999869999999847888998499


Q ss_pred             EEECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf             996389989999999769988997698989999999999999999999
Q gi|254780892|r   79 YLLMEVDFEKMIAGARAGANSFLLKPFNRETLRFAMRELPQMQKSKDE  126 (133)
Q Consensus        79 ~lT~~~~~~~~~~a~~~Ga~~yl~KP~~~~~L~~~i~~~~~~~~~~~~  126 (133)
                      ++|+.++.+...+++++||++||.|||+.++|..++++++++++...+
T Consensus        89 ~lt~~~~~~~~~~~~~~Ga~~yl~KP~~~~~L~~~i~~~l~~~~~~~E  136 (143)
T 3cnb_A           89 AMTGALTDDNVSRIVALGAETCFGKPLNFTLLEKTIKQLVEQKKATSE  136 (143)
T ss_dssp             EEESSCCHHHHHHHHHTTCSEEEESSCCHHHHHHHHHHHHHTTC----
T ss_pred             EEECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHCHHHCC
T ss_conf             998489989999999769989998989999999999999971576517