HHsearch results for GI: 254780892 and protein with PDBid: 3dzd_A
>3dzd_A Transcriptional regulator (NTRC family); sigma43 activator, AAA+ ATPase, response regulator, transcriptional activator, ATP-binding; HET: ADP; 2.40A {Aquifex aeolicus} PDB: 1zit_A 2jrl_A
Probab=99.94 E-value=8.1e-26 Score=172.94 Aligned_cols=118 Identities=19% Similarity=0.274 Sum_probs=109.6
Q ss_pred CEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCEEEECCCCCCC--CHHHHHHHHCCCCCCCEEEE
Q ss_conf 7799973998999999999998898999999979999999717999489970789987--73899996143488973999
Q gi|254780892|r 2 DSLLLVDSSHIVRKVGRHLFNDFGFMVFEATSVCEAREFCEKELLPNYLVIDESMEGV--LEFIAHVRQMPLGTDVFVYY 79 (133)
Q Consensus 2 ~~ILiVDD~~~~r~~l~~~L~~~g~~v~~a~~g~eAl~~~~~~~~pdlii~D~~mP~~--~~l~~~ir~~~~~~~~pii~ 79 (133)
||||||||++.+|..++..|+..||+|..|.|+.+|++.+.+. .||+||+|+.||++ .++++++|.. .+++|||+
T Consensus 1 kRILIVDDd~~i~~~l~~~L~~~G~~V~~a~s~~eAl~~l~~~-~~DlvllDl~mP~~dGlell~~ir~~--~p~~pVIv 77 (368)
T 3dzd_A 1 KRVLVVDDEESITSSLSAILEEEGYHPDTAKTLREAEKKIKEL-FFPVIVLDVWMPDGDGVNFIDFIKEN--SPDSVVIV 77 (368)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTCEEEEESSHHHHHHHHHHB-CCSEEEEESEETTEETTTHHHHHHHH--CTTCEEEE
T ss_pred CEEEEEECCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHC-CCCEEEEECCCCCCCHHHHHHHHHHC--CCCCCCCC
T ss_conf 9699992899999999999997799899979999999998717-99999997989999999999999963--99875445
Q ss_pred EECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHH
Q ss_conf 9638998999999976998899769898999999999999999
Q gi|254780892|r 80 LLMEVDFEKMIAGARAGANSFLLKPFNRETLRFAMRELPQMQK 122 (133)
Q Consensus 80 lT~~~~~~~~~~a~~~Ga~~yl~KP~~~~~L~~~i~~~~~~~~ 122 (133)
+|++++.+...+|++.||.||+.|||+.++|..+++++++..+
T Consensus 78 lT~~~~~~~av~Al~~GA~Dyl~KP~~~~~L~~~I~~ale~~~ 120 (368)
T 3dzd_A 78 ITGHGSVDTAVKAIKKGAYEFLEKPFSVERFLLTIKHAFEEYS 120 (368)
T ss_dssp EECSSCCHHHHHHHHHTCCEEEESSCCHHHHHHHHHHHHHHHS
T ss_pred CCCCCCHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHHHH
T ss_conf 5677999999999974876320588537999999999999997