HHsearch results for GI: 254780892 and protein with PDBid: 3f6p_A
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} PDB: 2zwm_A
Probab=99.95 E-value=1.8e-26 Score=176.82 Aligned_cols=115 Identities=22% Similarity=0.310 Sum_probs=105.8
Q ss_pred CEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCEEEECCCCCCC--CHHHHHHHHCCCCCCCEEEE
Q ss_conf 7799973998999999999998898999999979999999717999489970789987--73899996143488973999
Q gi|254780892|r 2 DSLLLVDSSHIVRKVGRHLFNDFGFMVFEATSVCEAREFCEKELLPNYLVIDESMEGV--LEFIAHVRQMPLGTDVFVYY 79 (133)
Q Consensus 2 ~~ILiVDD~~~~r~~l~~~L~~~g~~v~~a~~g~eAl~~~~~~~~pdlii~D~~mP~~--~~l~~~ir~~~~~~~~pii~ 79 (133)
+||||||||+.+|..++..|+.+||+|.+|.||.+|++.+.+ ..||+||+|++|||+ +++++++|+ .+++|+|+
T Consensus 3 krILiVDDd~~~~~~l~~~L~~~g~~v~~a~~~~~al~~l~~-~~~dlii~D~~mP~~~G~e~~~~~r~---~~~~~ii~ 78 (120)
T 3f6p_A 3 KKILVVDDEKPIADILEFNLRKEGYEVHCAHDGNEAVEMVEE-LQPDLILLDIMLPNKDGVEVCREVRK---KYDMPIIM 78 (120)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTCEEEEESSHHHHHHHHHT-TCCSEEEEETTSTTTHHHHHHHHHHT---TCCSCEEE
T ss_pred CCEEEEECCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHC-CCCCEEEEECCCCCCCHHHHHHHHHH---CCCCCEEE
T ss_conf 719999399999999999999889999998999999999971-89999998299999999999999981---68995899
Q ss_pred EECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHH
Q ss_conf 96389989999999769988997698989999999999999
Q gi|254780892|r 80 LLMEVDFEKMIAGARAGANSFLLKPFNRETLRFAMRELPQM 120 (133)
Q Consensus 80 lT~~~~~~~~~~a~~~Ga~~yl~KP~~~~~L~~~i~~~~~~ 120 (133)
+|++++.+...+|+++||++|+.|||+.++|..++++++++
T Consensus 79 lt~~~~~~~~~~a~~~Ga~~yl~KP~~~~~L~~~i~~~lrR 119 (120)
T 3f6p_A 79 LTAKDSEIDKVIGLEIGADDYVTKPFSTRELLARVKANLRR 119 (120)
T ss_dssp EEESSCHHHHHHHHHTTCCEEEEESCCHHHHHHHHHHHHTC
T ss_pred EECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCC
T ss_conf 97679999999999759998997999999999999999767