HHsearch results for GI: 254780892 and protein with PDBid: 3i42_A
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT}
Probab=99.94 E-value=9.1e-26 Score=172.64 Aligned_cols=119 Identities=13% Similarity=0.146 Sum_probs=107.3
Q ss_pred CCEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCEEEECCCCCCC--CHHHHHHHHCCCCCCCEEE
Q ss_conf 97799973998999999999998898999999979999999717999489970789987--7389999614348897399
Q gi|254780892|r 1 MDSLLLVDSSHIVRKVGRHLFNDFGFMVFEATSVCEAREFCEKELLPNYLVIDESMEGV--LEFIAHVRQMPLGTDVFVY 78 (133)
Q Consensus 1 m~~ILiVDD~~~~r~~l~~~L~~~g~~v~~a~~g~eAl~~~~~~~~pdlii~D~~mP~~--~~l~~~ir~~~~~~~~pii 78 (133)
|+||||||||+.+|+.++.+|+.+||+|..|.||.+|++.+.++ .||+|++|++||++ .++++++|+.+..+.+|||
T Consensus 3 ~~~vLiVDD~~~~~~~l~~~L~~~G~~v~~a~~g~eAl~~l~~~-~~dlillD~~mP~~~G~el~~~lr~~~~~~~~pii 81 (127)
T 3i42_A 3 LQQALIVEDYQAAAETFKELLEMLGFQADYVMSGTDALHAMSTR-GYDAVFIDLNLPDTSGLALVKQLRALPMEKTSKFV 81 (127)
T ss_dssp CEEEEEECSCHHHHHHHHHHHHHTTEEEEEESSHHHHHHHHHHS-CCSEEEEESBCSSSBHHHHHHHHHHSCCSSCCEEE
T ss_pred CCEEEEEECCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCC-CCCEEEECCCCCCCCHHHHHHHHHHCCCCCCCEEE
T ss_conf 88899995789999999999998799999989999999999808-99999862789998459999999847678999499
Q ss_pred EEECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHH
Q ss_conf 9963899899999997699889976989899999999999999
Q gi|254780892|r 79 YLLMEVDFEKMIAGARAGANSFLLKPFNRETLRFAMRELPQMQ 121 (133)
Q Consensus 79 ~lT~~~~~~~~~~a~~~Ga~~yl~KP~~~~~L~~~i~~~~~~~ 121 (133)
++|++++.+....+. .|+++||.|||+.++|..+++++....
T Consensus 82 ~lt~~~~~~~~~~~~-~g~~~~L~KP~~~~~L~~~l~~l~G~~ 123 (127)
T 3i42_A 82 AVSGFAKNDLGKEAC-ELFDFYLEKPIDIASLEPILQSIEGHH 123 (127)
T ss_dssp EEECC-CTTCCHHHH-HHCSEEEESSCCHHHHHHHHHHHC---
T ss_pred EEECCCCHHHHHHHH-HCCCEEEECCCCHHHHHHHHHHHCCCC
T ss_conf 997888799999997-178789979899999999999804888