HHsearch results for GI: 254780892 and protein with PDBid: 3nhm_A
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=99.95 E-value=1.7e-27 Score=182.91 Aligned_cols=121 Identities=18% Similarity=0.236 Sum_probs=109.1
Q ss_pred CC-EEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCCEEEECCCCCCC--CHHHHHHHHCCCCCCCEE
Q ss_conf 97-799973998999999999998898999999979999999717999489970789987--738999961434889739
Q gi|254780892|r 1 MD-SLLLVDSSHIVRKVGRHLFNDFGFMVFEATSVCEAREFCEKELLPNYLVIDESMEGV--LEFIAHVRQMPLGTDVFV 77 (133)
Q Consensus 1 m~-~ILiVDD~~~~r~~l~~~L~~~g~~v~~a~~g~eAl~~~~~~~~pdlii~D~~mP~~--~~l~~~ir~~~~~~~~pi 77 (133)
|| ||||||||+.+|..++.+|+ .||+|.+|.||.+|++.+.+ ..||+||+|++||++ +++++.+|+.+.++++||
T Consensus 3 mkprILiVDD~~~~r~~l~~~L~-~~~~v~~a~~g~eal~~l~~-~~pdliilD~~mP~~dG~el~~~ir~~~~~~~iPi 80 (133)
T 3nhm_A 3 LKPKVLIVENSWTMRETLRLLLS-GEFDCTTAADGASGLQQALA-HPPDVLISDVNMDGMDGYALCGHFRSEPTLKHIPV 80 (133)
T ss_dssp --CEEEEECSCHHHHHHHHHHHT-TTSEEEEESSHHHHHHHHHH-SCCSEEEECSSCSSSCHHHHHHHHHHSTTTTTCCE
T ss_pred CCCEEEEEECCHHHHHHHHHHHH-CCCEEEEECCHHHHHHHHHH-CCCCEEEECCCCCCCCHHHHHHHHHHCCCCCCCCE
T ss_conf 99979999498999999999997-89989998999999999984-79999997599999999999999982888899878
Q ss_pred EEEECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 99963899899999997699889976989899999999999999999
Q gi|254780892|r 78 YYLLMEVDFEKMIAGARAGANSFLLKPFNRETLRFAMRELPQMQKSK 124 (133)
Q Consensus 78 i~lT~~~~~~~~~~a~~~Ga~~yl~KP~~~~~L~~~i~~~~~~~~~~ 124 (133)
|++|++++. ...++.+.||++||.|||++++|..++++++++.+..
T Consensus 81 I~lT~~~~~-~~~~a~~~ga~~yl~KP~~~~~L~~~i~~~l~r~~~e 126 (133)
T 3nhm_A 81 IFVSGYAPR-TEGPADQPVPDAYLVKPVKPPVLIAQLHALLARAEAE 126 (133)
T ss_dssp EEEESCCC------TTSCCCSEEEESSCCHHHHHHHHHHHHHHHC--
T ss_pred EEEECCCHH-HHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHC
T ss_conf 997078849-9999987799789989999999999999999889706