RPSBLAST alignment of GI: 254780892 and protein with PDBid: 2j48
>2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus} Length = 119
Score = 49.3 bits (117), Expect = 2e-07
Identities = 18/116 (15%), Positives = 41/116 (35%), Gaps = 6/116 (5%)
Query: 4 LLLVDSSHIVRKVGRHLFNDFGFMVFEATSVCEAREFCEKELLPNYLVIDESMEGV--LE 61
+LL++ V + GF V A + + P +++ L
Sbjct: 4 ILLLEEEDEAATVVCEMLTAAGFKVIWLVDGSTALDQLDLLQ-PIVILMAWPPPDQSCLL 62
Query: 62 FIAHVRQMPLGTDVFVYYLLMEVDFEKMIAGARAGANSFLLKPFNRETLRFAMREL 117
+ H+R+ + ++ + + A A++ L KP + + L ++ L
Sbjct: 63 LLQHLREHQADPHPPL---VLFLGEPPVDPLLTAQASAILSKPLDPQLLLTTLQGL 115