RPSBLAST alignment of GI: 254780892 and protein with PDBid: 3cfy
>3cfy_A Putative LUXO repressor protein; structural genomics, unknown function, uncharacterized protein, signal receiver domain; 2.50A {Vibrio parahaemolyticus rimd 2210633} Length = 137
Score = 45.9 bits (108), Expect = 3e-06
Identities = 22/123 (17%), Positives = 47/123 (38%), Gaps = 3/123 (2%)
Query: 4 LLLVDSSHIVRKVGRHLFNDFGFMVFEATSVCEAREFCEKELLPNYLVIDESMEGVLEFI 63
+LLV+ S + + + D + +F + +A +F E+ L+I + +
Sbjct: 7 VLLVEDSTSLAILYKQYVKDEPYDIFHVETGRDAIQFIERS--KPQLIILDLKLPDMSGE 64
Query: 64 AHVRQM-PLGTDVFVYYLLMEVDFEKMIAGARAGANSFLLKPFNRETLRFAMRELPQMQK 122
+ + V + + + GA FL KP N + L+ ++ + K
Sbjct: 65 DVLDWINQNDIPTSVIIATAHGSVDLAVNLIQKGAEDFLEKPINADRLKTSVALHLKRAK 124
Query: 123 SKD 125
+D
Sbjct: 125 LED 127