RPSBLAST alignment of GI: 254780892 and protein with PDBid: 3dzd

>3dzd_A Transcriptional regulator (NTRC family); sigma43 activator, AAA+ ATPase, response regulator, transcriptional activator, ATP-binding; HET: ADP; 2.40A {Aquifex aeolicus} PDB: 1zit_A 2jrl_A Length = 368

 Score = 48.7 bits (116), Expect = 4e-07
 Identities = 24/132 (18%), Positives = 49/132 (37%), Gaps = 5/132 (3%)

Query: 4   LLLVDSSHIVRKVGRHLFNDFGFMVFEATSVCEAREFCEKELLPNYLVIDESMEGV--LE 61
           +L+VD    +      +  + G+    A ++ EA +  ++      +V+D  M     + 
Sbjct: 3   VLVVDDEESITSSLSAILEEEGYHPDTAKTLREAEKKIKEL-FFPVIVLDVWMPDGDGVN 61

Query: 62  FIAHVRQMPLGTDVFVYYLLMEVDFEKMIAGARAGANSFLLKPFNRETLRFAMRELPQMQ 121
           FI  +++     D  V  +      +  +   + GA  FL KPF+ E     ++   +  
Sbjct: 62  FIDFIKEN--SPDSVVIVITGHGSVDTAVKAIKKGAYEFLEKPFSVERFLLTIKHAFEEY 119

Query: 122 KSKDENQFLDAI 133
             K   Q     
Sbjct: 120 SKKAPPQEEIEF 131