RPSBLAST alignment of GI: 254780892 and protein with PDBid: 3hdv

>3hdv_A Response regulator; PSI-II, structural genomics, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.09A {Pseudomonas putida KT2440} Length = 136
 Score = 61.5 bits (149), Expect = 6e-11
 Identities = 23/115 (20%), Positives = 43/115 (37%), Gaps = 3/115 (2%)

Query: 5   LLVDSSHIVRKVGRHLFNDFGFMVFEATSVCEAREFCEKELLPNYLVIDESMEG--VLEF 62
           L+VD + + R+         G     A    EAR +   +     ++ D  M+    L+ 
Sbjct: 11  LVVDDNAVNREALILYLKSRGIDAVGADGAEEARLYLHYQKRIGLMITDLRMQPESGLDL 70

Query: 63  IAHVRQMPLGTDVFVYYLLMEVDFEKMIAGARAGANSFLLKPFNRETLRFAMREL 117
           I  +R       + +  +  + D E+ +     G   FLLKP +   L   + + 
Sbjct: 71  IRTIRASE-RAALSIIVVSGDTDVEEAVDVMHLGVVDFLLKPVDLGKLLELVNKE 124