RPSBLAST alignment of GI: 254780892 and protein with PDBid: 3hdv
>3hdv_A Response regulator; PSI-II, structural genomics, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.09A {Pseudomonas putida KT2440} Length = 136
Score = 61.5 bits (149), Expect = 6e-11
Identities = 23/115 (20%), Positives = 43/115 (37%), Gaps = 3/115 (2%)
Query: 5 LLVDSSHIVRKVGRHLFNDFGFMVFEATSVCEAREFCEKELLPNYLVIDESMEG--VLEF 62
L+VD + + R+ G A EAR + + ++ D M+ L+
Sbjct: 11 LVVDDNAVNREALILYLKSRGIDAVGADGAEEARLYLHYQKRIGLMITDLRMQPESGLDL 70
Query: 63 IAHVRQMPLGTDVFVYYLLMEVDFEKMIAGARAGANSFLLKPFNRETLRFAMREL 117
I +R + + + + D E+ + G FLLKP + L + +
Sbjct: 71 IRTIRASE-RAALSIIVVSGDTDVEEAVDVMHLGVVDFLLKPVDLGKLLELVNKE 124