HHsearch alignment for GI: 254780893 and conserved domain: COG1654
>COG1654 BirA Biotin operon repressor [Transcription].
Probab=94.47 E-value=0.14 Score=29.87 Aligned_cols=60 Identities=25% Similarity=0.301 Sum_probs=46.3
Q ss_pred CHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEECCC
Q ss_conf 116889998718997378999999871887777753036678999885110678884388887820264568
Q gi|254780893|r 153 KEYQMIELLSLRKNTTLTKEMFLNHLYDGRDEPEVKIIDVFICKLRKKLSNAAGGKNYIETVWGRGYVLREN 224 (236)
Q Consensus 153 ~E~~lL~~L~~~~g~vvsr~~i~~~vw~~~~~~~~~tld~~I~rLRkKL~~~~~~~~~I~tvrG~GY~l~~~ 224 (236)
T Consensus 4 ~~~~~~~ll~~~~~~~~SGe~La~~L-----giSRtaVwK~Iq~Lr~~-------G~~I~s~~~kGY~L~~~ 63 (79)
T COG1654 4 TSQMLLLLLLLLTGNFVSGEKLAEEL-----GISRTAVWKHIQQLREE-------GVDIESVRGKGYLLPQL 63 (79)
T ss_pred HHHHHHHHHHHCCCCCCCHHHHHHHH-----CCCHHHHHHHHHHHHHH-------CCCEEECCCCCEECCCC
T ss_conf 38999999997379966689999997-----86599999999999980-------97168607886365675