HHsearch alignment for GI: 254780893 and conserved domain: COG1959

>COG1959 Predicted transcriptional regulator [Transcription].
Probab=94.52  E-value=0.092  Score=31.01  Aligned_cols=60  Identities=18%  Similarity=0.321  Sum_probs=42.4

Q ss_pred             HHHHHHHHHCCCC-CCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECC--CEEEECCCCCC
Q ss_conf             6889998718997-3789999998718877777530366789998851106788843888878--20264568875
Q gi|254780893|r  155 YQMIELLSLRKNT-TLTKEMFLNHLYDGRDEPEVKIIDVFICKLRKKLSNAAGGKNYIETVWG--RGYVLRENAKD  227 (236)
Q Consensus       155 ~~lL~~L~~~~g~-vvsr~~i~~~vw~~~~~~~~~tld~~I~rLRkKL~~~~~~~~~I~tvrG--~GY~l~~~~~~  227 (236)
T Consensus        11 l~~L~~LA~~~~~~~~s~~~IA~~~-----~is~~~L~kil~~L~ka--------GlV~S~rG~~GGy~Lar~~~~   73 (150)
T COG1959          11 LRALLYLALLPGGGPVSSAEIAERQ-----GISPSYLEKILSKLRKA--------GLVKSVRGKGGGYRLARPPEE   73 (150)
T ss_pred             HHHHHHHHHCCCCCCCCHHHHHHHH-----CCCHHHHHHHHHHHHHC--------CCEEEECCCCCCEECCCCHHH
T ss_conf             9999999848898846499999998-----91999999999999877--------987852079989202389797