HHsearch alignment for GI: 254780893 and conserved domain: PRK09191

>PRK09191 two-component response regulator; Provisional.
Probab=99.68  E-value=6e-17  Score=122.43  Aligned_cols=111  Identities=21%  Similarity=0.331  Sum_probs=92.9

Q ss_pred             EEEEECCCHHHHHHHHHHHHHCCCEEE-EECCHHHHHHHHHHCCCCEEEECCCCCC-CCCCCCCCCCCCCCCCCCEECCC
Q ss_conf             599986998999999999998898999-9999899999998579947883114987-43343111222232233100133
Q gi|254780893|r    2 RILLIEDDKALAHSIELMLKSENFNVY-VTDLGEDGIELCKFYEFDAIILDLGLTD-IPGFEVLRALRVAKISTPVCILS   79 (236)
Q Consensus         2 kILivedd~~~~~~l~~~L~~~g~~v~-~a~~~~eal~~~~~~~~DlvIlD~~lp~-~~G~~~~~~ir~~~~~~pII~ls   79 (236)
T Consensus       139 rILIVEDE~lIAmdLe~~l~~lG~~V~GiA~t~~eAl~la~~~~PDlvL~DI~L~d~~sGIdaa~~I~~~-~~iPvIFiT  217 (261)
T PRK09191        139 SVLIIEDEPIIAMDLEQLVESLGHRVVGIARTRAEAVALAKKTRPGLILADIQLADGSSGIDAVNDILKT-FDVPVIFIT  217 (261)
T ss_pred             CEEEECCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHH-CCCCEEEEC
T ss_conf             8799858599999999999987996787627899999997425989899953479998799999999982-899989977


Q ss_pred             CCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             321000001123221011122332221111122222
Q gi|254780893|r   80 GMSSIEDKVRGLQSGADDYISKPFNKEELVARIRAI  115 (236)
Q Consensus        80 ~~~~~~~~~~al~~GAddyi~KP~~~~eL~ari~~l  115 (236)
T Consensus       218 Ayperlltg~~~ep--~~li~KPf~~~~v~aai~qA  251 (261)
T PRK09191        218 AFPERLLTGERPEP--AFLITKPFQPDTVKAAISQA  251 (261)
T ss_pred             CCHHHHCCCCCCCC--CEEECCCCCHHHHHHHHHHH
T ss_conf             78465302788887--40356989889999999999