HHsearch alignment for GI: 254780893 and conserved domain: PRK09191
>PRK09191 two-component response regulator; Provisional.
Probab=99.68 E-value=6e-17 Score=122.43 Aligned_cols=111 Identities=21% Similarity=0.331 Sum_probs=92.9
Q ss_pred EEEEECCCHHHHHHHHHHHHHCCCEEE-EECCHHHHHHHHHHCCCCEEEECCCCCC-CCCCCCCCCCCCCCCCCCEECCC
Q ss_conf 599986998999999999998898999-9999899999998579947883114987-43343111222232233100133
Q gi|254780893|r 2 RILLIEDDKALAHSIELMLKSENFNVY-VTDLGEDGIELCKFYEFDAIILDLGLTD-IPGFEVLRALRVAKISTPVCILS 79 (236)
Q Consensus 2 kILivedd~~~~~~l~~~L~~~g~~v~-~a~~~~eal~~~~~~~~DlvIlD~~lp~-~~G~~~~~~ir~~~~~~pII~ls 79 (236)
T Consensus 139 rILIVEDE~lIAmdLe~~l~~lG~~V~GiA~t~~eAl~la~~~~PDlvL~DI~L~d~~sGIdaa~~I~~~-~~iPvIFiT 217 (261)
T PRK09191 139 SVLIIEDEPIIAMDLEQLVESLGHRVVGIARTRAEAVALAKKTRPGLILADIQLADGSSGIDAVNDILKT-FDVPVIFIT 217 (261)
T ss_pred CEEEECCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHH-CCCCEEEEC
T ss_conf 8799858599999999999987996787627899999997425989899953479998799999999982-899989977
Q ss_pred CCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 321000001123221011122332221111122222
Q gi|254780893|r 80 GMSSIEDKVRGLQSGADDYISKPFNKEELVARIRAI 115 (236)
Q Consensus 80 ~~~~~~~~~~al~~GAddyi~KP~~~~eL~ari~~l 115 (236)
T Consensus 218 Ayperlltg~~~ep--~~li~KPf~~~~v~aai~qA 251 (261)
T PRK09191 218 AFPERLLTGERPEP--AFLITKPFQPDTVKAAISQA 251 (261)
T ss_pred CCHHHHCCCCCCCC--CEEECCCCCHHHHHHHHHHH
T ss_conf 78465302788887--40356989889999999999