HHsearch alignment for GI: 254780893 and conserved domain: PRK09958
>PRK09958 DNA-binding transcriptional activator EvgA; Provisional.
Probab=99.97 E-value=5.9e-30 Score=200.74 Aligned_cols=185 Identities=17% Similarity=0.225 Sum_probs=155.6
Q ss_pred CEEEEECCCHHHHHHHHHHHHHCCCEEE-EECCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEECCC
Q ss_conf 9599986998999999999998898999-999989999999857994788311498743343111222232233100133
Q gi|254780893|r 1 MRILLIEDDKALAHSIELMLKSENFNVY-VTDLGEDGIELCKFYEFDAIILDLGLTDIPGFEVLRALRVAKISTPVCILS 79 (236)
Q Consensus 1 mkILivedd~~~~~~l~~~L~~~g~~v~-~a~~~~eal~~~~~~~~DlvIlD~~lp~~~G~~~~~~ir~~~~~~pII~ls 79 (236)
T Consensus 1 m~vlivDDh~lvr~gl~~ll~~~~~~vv~~~~~~~~~l~~~~~~~pDvvllDl~lp~~~G~~~~~~ir~~~~~~~viv~s 80 (204)
T PRK09958 1 MNAIIIDDHPLAIAAIRNLLIKNDIEILAELTEGGSAVQRVETLKPDIVIIDVDIPGVNGIQVLETLRKRQYSGIIIIVS 80 (204)
T ss_pred CEEEEECCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHCCCEEEEEEE
T ss_conf 98999869899999999999868998999979999999998743979999958999998416788898727980599997
Q ss_pred CCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCHHHHH
Q ss_conf 3210000011232210111223322211111222222222222222222222222222222233333-222464116889
Q gi|254780893|r 80 GMSSIEDKVRGLQSGADDYISKPFNKEELVARIRAIVRRSRGHAQSLIVTGDLSVNLDAKTVEVQGH-RIHLTGKEYQMI 158 (236)
Q Consensus 80 ~~~~~~~~~~al~~GAddyi~KP~~~~eL~ari~~llrr~~~~~~~~~~~g~~~~d~~~~~v~~~g~-~i~LT~~E~~lL 158 (236)
T Consensus 81 ~~~~~~~~~~a~~~Ga~g~l~K~~~~~~l~~aI~~v~~G~~~~~~~--------~~~~~~~~~~~~~~~~~Lt~RE~eVL 152 (204)
T PRK09958 81 AKNDHFYGKHCADAGANGFVSKKEGMNNIIAAIEAAKNGYCYFPFS--------LNRFVGSLTSDQQKLDSLSKQEISVM 152 (204)
T ss_pred CCCCCHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCHH--------HHHHHHHCCCCCCCCCCCCHHHHHHH
T ss_conf 2465211443352686379978999999999999997799708899--------99998631356311256899999999
Q ss_pred HHHHHCCCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 99871899737899999987188777775303667899988511
Q gi|254780893|r 159 ELLSLRKNTTLTKEMFLNHLYDGRDEPEVKIIDVFICKLRKKLS 202 (236)
Q Consensus 159 ~~L~~~~g~vvsr~~i~~~vw~~~~~~~~~tld~~I~rLRkKL~ 202 (236)
T Consensus 153 ~ll~~--G--~snkeIA~~L-----~iS~~TV~~h~~~i~~KL~ 187 (204)
T PRK09958 153 RYILD--G--KDNNDIAEKM-----FISNKTVSTYKSRLMEKLE 187 (204)
T ss_pred HHHHC--C--CCHHHHHHHH-----CCCHHHHHHHHHHHHHHHC
T ss_conf 99986--9--9999999897-----8899999999999999848