HHsearch alignment for GI: 254780893 and conserved domain: PRK09959

>PRK09959 hybrid sensory histidine kinase in two-component regulatory system with EvgA; Provisional.
Probab=99.92  E-value=8.1e-26  Score=175.83  Aligned_cols=114  Identities=21%  Similarity=0.381  Sum_probs=108.2

Q ss_pred             CEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEECCCC
Q ss_conf             95999869989999999999988989999999899999998579947883114987433431112222322331001333
Q gi|254780893|r    1 MRILLIEDDKALAHSIELMLKSENFNVYVTDLGEDGIELCKFYEFDAIILDLGLTDIPGFEVLRALRVAKISTPVCILSG   80 (236)
Q Consensus         1 mkILivedd~~~~~~l~~~L~~~g~~v~~a~~~~eal~~~~~~~~DlvIlD~~lp~~~G~~~~~~ir~~~~~~pII~ls~   80 (236)
T Consensus       959 l~ILvVeDn~~Nr~ll~~~L~~lG~~v~~a~nG~eAl~~~~~~~fDlILmDi~MP~MDG~e~tr~IR~~~~~~PIialTA 1038 (1197)
T PRK09959        959 LSILIADDHPTNRLLLKRQLNLLGYDVDEATDGVQALHKVSMQHYDLLITDVNMPNMDGFELTRKLREQNSSLPIWGLTA 1038 (1197)
T ss_pred             CEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHCCCCCCCEEEEEC
T ss_conf             87999799899999999999983999999899999999976699999998797899989999999964698694899979


Q ss_pred             CCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             2100000112322101112233222111112222
Q gi|254780893|r   81 MSSIEDKVRGLQSGADDYISKPFNKEELVARIRA  114 (236)
Q Consensus        81 ~~~~~~~~~al~~GAddyi~KP~~~~eL~ari~~  114 (236)
T Consensus      1039 ~a~~~~~~~cl~aGMdd~L~KPi~l~~L~~~L~~ 1072 (1197)
T PRK09959       1039 NAQANEREKGLNCGMNLCLFKPLTLDVLKTHLSQ 1072 (1197)
T ss_pred             CCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHH
T ss_conf             9999999999976998345188989999999985