HHsearch alignment for GI: 254780893 and conserved domain: PRK09959
>PRK09959 hybrid sensory histidine kinase in two-component regulatory system with EvgA; Provisional.
Probab=99.92 E-value=8.1e-26 Score=175.83 Aligned_cols=114 Identities=21% Similarity=0.381 Sum_probs=108.2
Q ss_pred CEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEECCCC
Q ss_conf 95999869989999999999988989999999899999998579947883114987433431112222322331001333
Q gi|254780893|r 1 MRILLIEDDKALAHSIELMLKSENFNVYVTDLGEDGIELCKFYEFDAIILDLGLTDIPGFEVLRALRVAKISTPVCILSG 80 (236)
Q Consensus 1 mkILivedd~~~~~~l~~~L~~~g~~v~~a~~~~eal~~~~~~~~DlvIlD~~lp~~~G~~~~~~ir~~~~~~pII~ls~ 80 (236)
T Consensus 959 l~ILvVeDn~~Nr~ll~~~L~~lG~~v~~a~nG~eAl~~~~~~~fDlILmDi~MP~MDG~e~tr~IR~~~~~~PIialTA 1038 (1197)
T PRK09959 959 LSILIADDHPTNRLLLKRQLNLLGYDVDEATDGVQALHKVSMQHYDLLITDVNMPNMDGFELTRKLREQNSSLPIWGLTA 1038 (1197)
T ss_pred CEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHCCCCCCCEEEEEC
T ss_conf 87999799899999999999983999999899999999976699999998797899989999999964698694899979
Q ss_pred CCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 2100000112322101112233222111112222
Q gi|254780893|r 81 MSSIEDKVRGLQSGADDYISKPFNKEELVARIRA 114 (236)
Q Consensus 81 ~~~~~~~~~al~~GAddyi~KP~~~~eL~ari~~ 114 (236)
T Consensus 1039 ~a~~~~~~~cl~aGMdd~L~KPi~l~~L~~~L~~ 1072 (1197)
T PRK09959 1039 NAQANEREKGLNCGMNLCLFKPLTLDVLKTHLSQ 1072 (1197)
T ss_pred CCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHH
T ss_conf 9999999999976998345188989999999985